Strain Fitness in Agrobacterium fabrum C58 around Atu1472

Experiment: Indole-3-pyruvic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-pyruvic 5 mM
1,465,699	+				-1.5
1,465,699	+				+0.5
1,465,836	-		Atu1471	0.16	-0.8
1,466,622	+				+1.4
1,466,637	+				+1.0
1,466,711	+				+0.1
1,466,887	+		Atu1472	0.31	+0.7
1,466,931	+		Atu1472	0.38	-0.3
1,467,008	+		Atu1472	0.49	+0.3
1,467,155	+		Atu1472	0.71	+0.4
1,467,219	+		Atu1472	0.81	+0.9
1,467,247	-		Atu1472	0.85	+0.6
1,467,265	+		Atu1472	0.88	+0.2
1,467,265	+		Atu1472	0.88	-0.8
1,467,265	+		Atu1472	0.88	+0.0
1,467,265	+		Atu1472	0.88	+0.4
1,467,265	+		Atu1472	0.88	-0.0
1,467,298	-				+0.8
1,467,408	+				+2.4
1,468,206	+				+0.6
1,468,210	+				-0.1
1,468,298	-		Atu1474	0.13	+0.1
1,468,330	+		Atu1474	0.20	-0.0
1,468,338	-		Atu1474	0.22	-0.8
1,468,338	-		Atu1474	0.22	-0.2