Strain Fitness in Agrobacterium fabrum C58 around Atu4459

Experiment: Indole-3-butyric 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-butyric 5 mM
1,603,048	-		Atu4457	0.78	+0.0
1,603,052	+		Atu4457	0.78	-0.4
1,603,145	-				-0.5
1,603,236	-				-0.2
1,603,499	-		Atu4458	0.49	-0.0
1,603,643	-		Atu4458	0.79	+0.4
1,603,643	-		Atu4458	0.79	+0.0
1,603,793	-				-0.1
1,603,894	+				-0.4
1,603,965	-				+0.8
1,604,022	-				+0.6
1,604,071	+				+0.2
1,604,185	+		Atu4459	0.20	-0.2
1,604,296	+		Atu4459	0.33	+0.4
1,604,296	+		Atu4459	0.33	+0.1
1,604,304	-		Atu4459	0.34	-0.3
1,604,394	-		Atu4459	0.44	+0.3
1,604,415	+		Atu4459	0.47	+0.2
1,604,433	-		Atu4459	0.49	+0.8
1,604,657	-		Atu4459	0.74	+0.5
1,604,682	-		Atu4459	0.77	+0.5
1,604,885	+				-0.2
1,605,164	+				-0.0
1,605,583	+		Atu4462	0.12	+0.1
1,605,673	+		Atu4462	0.21	+0.3
1,605,755	+		Atu4462	0.29	-1.9