Strain Fitness in Agrobacterium fabrum C58 around Atu2634
Experiment: Indole-3-butyric 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Indole-3-butyric 5 mM |
---|---|---|---|---|---|
remove | |||||
2,617,160 | + | Atu2633 | 0.18 | +0.1 | |
2,617,191 | + | Atu2633 | 0.23 | -0.1 | |
2,617,202 | - | Atu2633 | 0.25 | +0.1 | |
2,617,713 | - | -1.4 | |||
2,617,753 | - | Atu2634 | 0.11 | +0.1 | |
2,617,787 | - | Atu2634 | 0.19 | +0.3 | |
2,618,015 | - | Atu2634 | 0.74 | +1.4 | |
2,618,135 | - | +0.3 |
Or see this region's nucleotide sequence