Strain Fitness in Agrobacterium fabrum C58 around Atu2574

Experiment: Indole-3-butyric 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-butyric 5 mM
2,543,808	-				-0.2
2,543,899	+		Atu2573	0.19	+0.2
2,543,932	-		Atu2573	0.23	-0.5
2,543,988	+		Atu2573	0.31	+0.7
2,544,134	-		Atu2573	0.52	-0.2
2,544,196	+		Atu2573	0.61	+0.3
2,544,206	+		Atu2573	0.63	+0.3
2,544,308	-		Atu2573	0.77	-0.3
2,544,393	+		Atu2573	0.90	-0.6
2,544,439	-				-0.1
2,544,618	+				-0.3
2,544,800	+				+1.6
2,544,811	+				-0.2
2,544,826	-				-0.2
2,544,833	+				+0.3
2,544,854	-				-0.1
2,545,023	+		Atu2574	0.33	-0.3
2,545,247	-		Atu2574	0.68	-0.3
2,545,259	-		Atu2574	0.70	-1.1
2,545,305	+		Atu2574	0.77	+0.6
2,545,305	+		Atu2574	0.77	-0.2
2,545,305	+		Atu2574	0.77	-0.2
2,545,374	+		Atu2574	0.87	+0.4
2,545,411	-				+0.2
2,545,432	+				-0.3
2,545,499	-				-0.1
2,545,589	-				-0.1
2,545,693	+				-0.1
2,545,710	-		Atu2575	0.11	+0.6
2,545,781	-		Atu2575	0.13	+0.1
2,545,819	+		Atu2575	0.15	-0.6
2,545,928	+		Atu2575	0.19	-0.1
2,545,933	+		Atu2575	0.20	-1.4
2,545,933	+		Atu2575	0.20	+0.0
2,545,939	-		Atu2575	0.20	-0.0
2,545,941	+		Atu2575	0.20	-0.3
2,545,986	+		Atu2575	0.22	+0.2
2,546,027	+		Atu2575	0.23	-0.1
2,546,035	+		Atu2575	0.24	+0.0
2,546,035	-		Atu2575	0.24	-0.7
2,546,042	+		Atu2575	0.24	+0.4
2,546,072	+		Atu2575	0.25	+1.0
2,546,106	-		Atu2575	0.27	+0.1
2,546,237	+		Atu2575	0.32	-0.0
2,546,245	-		Atu2575	0.32	-0.1
2,546,250	-		Atu2575	0.32	+0.8
2,546,300	+		Atu2575	0.35	-0.1
2,546,308	-		Atu2575	0.35	-0.6
2,546,308	-		Atu2575	0.35	+1.0
2,546,353	-		Atu2575	0.37	+0.8
2,546,353	-		Atu2575	0.37	+0.1
2,546,386	-		Atu2575	0.38	+0.2
2,546,386	-		Atu2575	0.38	-0.1