Strain Fitness in Agrobacterium fabrum C58 around Atu2396

Experiment: Indole-3-butyric 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-butyric 5 mM
2,368,359	+				-0.4
2,368,372	-				+0.2
2,368,565	-		Atu2395	0.12	-0.5
2,368,800	+		Atu2395	0.40	+0.3
2,368,966	-		Atu2395	0.60	+0.1
2,368,985	+		Atu2395	0.62	-0.2
2,368,989	-		Atu2395	0.63	+0.4
2,368,999	-		Atu2395	0.64	+0.1
2,369,058	+		Atu2395	0.71	+0.1
2,369,058	+		Atu2395	0.71	-0.5
2,369,058	+		Atu2395	0.71	+1.1
2,369,066	-		Atu2395	0.72	+0.2
2,369,066	-		Atu2395	0.72	-0.3
2,369,066	-		Atu2395	0.72	-0.3
2,369,102	+		Atu2395	0.77	+0.0
2,369,116	+		Atu2395	0.78	-0.3
2,369,124	-		Atu2395	0.79	+0.0
2,369,228	-				-0.1
2,369,399	+		Atu2396	0.17	+0.2
2,369,409	+		Atu2396	0.18	+0.9
2,369,423	+		Atu2396	0.20	+0.1
2,369,423	+		Atu2396	0.20	-1.2
2,369,604	+		Atu2396	0.50	+0.5
2,369,713	-		Atu2396	0.68	+0.9
2,369,924	-				+0.2
2,369,961	-				-0.3
2,369,991	-				-1.1
2,370,014	+				+0.1
2,370,023	-				+0.2
2,370,237	+		Atu2397	0.11	-0.0
2,370,263	-		Atu2397	0.15	-0.1
2,370,265	-		Atu2397	0.15	-0.1
2,370,463	-		Atu2397	0.47	-0.2
2,370,520	+		Atu2397	0.56	+0.3
2,370,546	+		Atu2397	0.60	+0.1
2,370,601	+		Atu2397	0.69	+0.2
2,370,609	-		Atu2397	0.70	+0.1
2,370,614	-		Atu2397	0.71	-0.1
2,370,621	-		Atu2397	0.72	+0.2
2,370,695	+		Atu2397	0.83	+0.5
2,370,803	-				+0.0
2,370,840	+				-0.4
2,370,848	-				+0.3
2,370,906	-		Atu2398	0.11	+0.6