Strain Fitness in Agrobacterium fabrum C58 around Atu2262

Experiment: Indole-3-butyric 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-butyric 5 mM
2,233,950	-				-0.0
2,234,018	-				+0.6
2,234,070	+		Atu2261	0.14	+0.2
2,234,268	-		Atu2261	0.34	+0.0
2,234,293	+		Atu2261	0.36	-0.7
2,234,301	-		Atu2261	0.37	-0.5
2,234,301	-		Atu2261	0.37	-0.2
2,234,327	-		Atu2261	0.40	-0.1
2,234,459	+		Atu2261	0.53	+0.0
2,234,460	-		Atu2261	0.53	-0.7
2,234,598	-		Atu2261	0.67	-0.2
2,234,642	-		Atu2261	0.72	+0.2
2,234,642	-		Atu2261	0.72	-0.2
2,234,677	+		Atu2261	0.75	-1.2
2,234,739	+		Atu2261	0.81	+0.0
2,234,796	-		Atu2261	0.87	+0.1
2,234,830	-				+0.2
2,234,844	+				+0.3
2,234,872	-				-0.0
2,234,879	+				+0.4
2,235,021	+		Atu2262	0.16	-0.3
2,235,022	+		Atu2262	0.16	+0.1
2,235,090	+		Atu2262	0.30	-0.4
2,235,098	+		Atu2262	0.32	+2.3
2,235,163	+		Atu2262	0.45	+2.2
2,235,212	+		Atu2262	0.55	-0.1
2,235,232	-		Atu2262	0.59	+0.1
2,235,333	+		Atu2262	0.80	+0.2
2,235,333	+		Atu2262	0.80	+0.9
2,235,384	-				-0.1
2,235,389	-				-0.0
2,235,389	-				-0.0
2,235,396	-				+0.3
2,235,425	+				-0.0
2,235,493	+				-0.9
2,235,501	+				+0.1