Strain Fitness in Agrobacterium fabrum C58 around Atu2232

Experiment: Indole-3-butyric 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-butyric 5 mM
2,203,658	+		Atu2231	0.16	+0.4
2,203,733	+		Atu2231	0.32	-0.1
2,203,897	-		Atu2231	0.69	-0.6
2,203,921	-		Atu2231	0.74	-0.4
2,203,929	+		Atu2231	0.76	-0.6
2,203,950	-		Atu2231	0.80	-0.1
2,203,978	-		Atu2231	0.87	+0.1
2,204,000	+				-0.5
2,204,062	+				+0.3
2,204,070	-				-0.1
2,204,070	-				-0.1
2,204,081	+				+1.6
2,204,090	+				-0.9
2,204,149	+		Atu2232	0.21	-0.0
2,204,155	+		Atu2232	0.22	+0.1
2,204,157	-		Atu2232	0.23	+1.4
2,204,294	+		Atu2232	0.67	+0.7
2,204,294	+		Atu2232	0.67	+0.1
2,204,294	+		Atu2232	0.67	-1.2
2,204,302	-		Atu2232	0.70	+0.2
2,204,329	+		Atu2232	0.78	+1.6
2,204,337	-		Atu2232	0.81	+1.1
2,204,485	-				-0.2
2,204,485	-				+0.1
2,204,505	+				-0.4
2,204,567	+				-0.1
2,204,600	-				+0.2