Strain Fitness in Agrobacterium fabrum C58 around Atu2166

Experiment: Indole-3-butyric 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-butyric 5 mM
2,132,423	+		Atu2165	0.64	-0.2
2,132,449	-		Atu2165	0.65	-1.1
2,132,472	+		Atu2165	0.66	-0.1
2,132,479	+		Atu2165	0.66	-2.4
2,132,480	-		Atu2165	0.66	+0.3
2,132,600	-		Atu2165	0.71	+0.5
2,132,600	-		Atu2165	0.71	-0.4
2,132,689	-		Atu2165	0.74	-0.9
2,132,755	+		Atu2165	0.77	+0.6
2,132,768	-		Atu2165	0.77	+0.1
2,132,813	-		Atu2165	0.79	+0.2
2,132,905	+		Atu2165	0.83	-0.2
2,133,070	-		Atu2165	0.89	+0.1
2,133,110	+				+0.0
2,133,215	-				+0.4
2,133,285	+				+0.5
2,133,334	-				-0.3
2,133,370	-				+0.3
2,133,512	+				+0.2
2,133,599	-		Atu2166	0.19	+2.1
2,133,651	-		Atu2166	0.24	+0.8
2,133,687	-		Atu2166	0.28	+0.5
2,133,760	-		Atu2166	0.35	+1.4
2,133,949	+		Atu2166	0.55	+0.3
2,133,949	+		Atu2166	0.55	+0.7
2,133,959	-		Atu2166	0.56	-0.2
2,133,997	+		Atu2166	0.60	-0.2
2,134,322	+				+0.6
2,134,337	-				+0.3
2,134,465	-				+0.4