Strain Fitness in Agrobacterium fabrum C58 around Atu0874

Experiment: Indole-3-butyric 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Indole-3-butyric 5 mM
870,749	+				-0.1
870,766	-				+0.2
870,785	-				+0.4
870,804	+				+0.2
870,812	-				-0.0
870,822	-				-0.1
870,937	-		Atu0873	0.21	-0.0
870,966	+		Atu0873	0.24	+0.4
870,968	-		Atu0873	0.24	+1.5
870,969	-		Atu0873	0.24	-0.1
870,971	+		Atu0873	0.25	+0.1
870,979	-		Atu0873	0.26	-0.7
871,008	+		Atu0873	0.29	-0.6
871,093	+		Atu0873	0.38	-0.3
871,098	+		Atu0873	0.39	-0.1
871,103	+		Atu0873	0.40	-1.0
871,106	-		Atu0873	0.40	+0.2
871,212	+		Atu0873	0.52	-0.1
871,368	+		Atu0873	0.69	-0.2
871,381	+		Atu0873	0.71	-0.5
871,519	+		Atu0873	0.86	+1.2
871,521	+		Atu0873	0.87	+0.3
871,546	+		Atu0873	0.89	-0.1
871,709	+				-0.2
871,726	+				-0.8
871,905	-		Atu0874	0.31	-0.1
872,042	+		Atu0874	0.56	+1.3
872,075	+		Atu0874	0.62	+0.2
872,174	-		Atu0874	0.81	+0.1
872,199	+		Atu0874	0.85	-0.5
872,244	+				+0.4
872,255	+				+0.2
872,349	-		Atu0875	0.14	-0.2
872,354	+		Atu0875	0.15	-0.4
872,491	-		Atu0875	0.43	+0.2
872,499	+		Atu0875	0.45	-0.2
872,499	+		Atu0875	0.45	+0.2
872,499	+		Atu0875	0.45	-0.3
872,520	-		Atu0875	0.49	+1.0
872,606	-		Atu0875	0.67	-0.1
872,606	-		Atu0875	0.67	-0.5
872,631	-		Atu0875	0.72	-0.8
872,658	-		Atu0875	0.78	-0.2
872,671	+		Atu0875	0.81	+0.0
872,770	+				+0.1
872,780	+				-0.8
872,786	+				+1.8
872,807	+				+0.2
872,815	-				-0.2
872,838	-				+0.1
873,017	-		Atu0876	0.28	-0.0
873,186	-		Atu0876	0.56	+0.3
873,222	-		Atu0876	0.62	-0.0