Experiment: Cinnamic 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu2829 and Atu2830 are separated by 19 nucleotides Atu2830 and Atu2831 are separated by 11 nucleotides Atu2831 and Atu2832 are separated by 62 nucleotides
Atu2829: Atu2829 - Chromosome partitioning protein, at 2,833,540 to 2,834,334
Atu2829
Atu2830: Atu2830 - glucose inhibited division protein, at 2,834,354 to 2,834,971
Atu2830
Atu2831: Atu2831 - glucose inhibited division protein A, at 2,834,983 to 2,836,866
Atu2831
Atu2832: Atu2832 - tRNA modification GTPase, at 2,836,929 to 2,838,257
Atu2832
Position (kb)
2834
2835
2836
2837 Strain fitness (log2 ratio)
-2
-1
0
1 at 2834.938 kb on - strand at 2835.275 kb on + strand, within Atu2831 at 2835.310 kb on - strand, within Atu2831 at 2835.351 kb on + strand, within Atu2831 at 2835.429 kb on - strand, within Atu2831 at 2835.714 kb on - strand, within Atu2831 at 2835.887 kb on - strand, within Atu2831 at 2835.887 kb on - strand, within Atu2831 at 2835.887 kb on - strand, within Atu2831 at 2836.383 kb on + strand, within Atu2831 at 2836.391 kb on - strand, within Atu2831 at 2836.907 kb on - strand at 2836.917 kb on - strand at 2837.056 kb on - strand at 2837.378 kb on + strand, within Atu2832 at 2837.528 kb on + strand, within Atu2832 at 2837.558 kb on - strand, within Atu2832 at 2837.678 kb on + strand, within Atu2832
Per-strain Table
Position Strand Gene LocusTag Fraction Cinnamic 1.25 mM remove 2,834,938 - +0.4 2,835,275 + Atu2831 0.15 -1.0 2,835,310 - Atu2831 0.17 -0.3 2,835,351 + Atu2831 0.20 -1.3 2,835,429 - Atu2831 0.24 +0.1 2,835,714 - Atu2831 0.39 -0.6 2,835,887 - Atu2831 0.48 +0.2 2,835,887 - Atu2831 0.48 -1.8 2,835,887 - Atu2831 0.48 -0.7 2,836,383 + Atu2831 0.74 -1.7 2,836,391 - Atu2831 0.75 +0.2 2,836,907 - -0.2 2,836,917 - +0.5 2,837,056 - +0.5 2,837,378 + Atu2832 0.34 -0.1 2,837,528 + Atu2832 0.45 +0.0 2,837,558 - Atu2832 0.47 +0.2 2,837,678 + Atu2832 0.56 +0.5
Or see this region's nucleotide sequence