Strain Fitness in Pseudomonas putida KT2440 around PP_3203

Experiment: pH 9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 9
3,635,238	+		PP_3202	0.66	+0.3
3,635,301	+		PP_3202	0.68	+0.1
3,635,301	+		PP_3202	0.68	-0.8
3,635,301	+		PP_3202	0.68	+0.4
3,635,302	-		PP_3202	0.68	-0.4
3,635,302	-		PP_3202	0.68	-1.6
3,635,331	+		PP_3202	0.70	-1.0
3,635,331	+				-0.6
3,635,337	+		PP_3202	0.70	+0.1
3,635,591	-		PP_3202	0.80	+1.1
3,635,695	-		PP_3202	0.84	-0.2
3,635,695	-		PP_3202	0.84	-1.0
3,635,704	-		PP_3202	0.85	+1.2
3,635,704	-		PP_3202	0.85	-0.3
3,635,704	-		PP_3202	0.85	+1.2
3,635,760	+		PP_3202	0.87	+3.5
3,635,761	-		PP_3202	0.87	-1.2
3,635,941	-				+1.0
3,635,951	-				+2.7
3,636,170	+				+0.0
3,636,334	+		PP_3203	0.22	-2.6
3,636,457	+		PP_3203	0.32	-1.8
3,636,458	-		PP_3203	0.32	-1.0
3,636,587	-		PP_3203	0.43	+0.4
3,636,587	-		PP_3203	0.43	+1.4
3,636,587	-		PP_3203	0.43	+1.3
3,636,707	+		PP_3203	0.53	+1.7
3,636,708	-		PP_3203	0.53	+0.2
3,636,780	-		PP_3203	0.59	+1.2
3,636,780	-		PP_3203	0.59	+3.1
3,636,780	-		PP_3203	0.59	+0.6
3,636,788	+		PP_3203	0.60	-2.7
3,636,788	+		PP_3203	0.60	+0.4
3,636,789	-		PP_3203	0.60	-0.1
3,636,789	-		PP_3203	0.60	-0.3
3,637,299	-				-0.3
3,637,386	-				-1.3
3,637,464	+				+3.0
3,637,464	+				+0.5
3,637,465	-				+0.5
3,637,563	-		PP_3204	0.24	+1.1
3,637,563	-		PP_3204	0.24	+0.8
3,637,817	+		PP_3204	0.67	+2.2
3,637,818	-		PP_3204	0.68	-3.3
3,638,161	+		PP_3205	0.16	-0.9