Strain Fitness in Pseudomonas putida KT2440 around PP_2254

Experiment: pH 9

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 9
2,569,455	+				-1.4
2,569,455	+				+0.1
2,569,456	-				+0.3
2,569,588	+				-4.1
2,569,588	+				+4.3
2,569,590	+				+1.6
2,569,590	+				-3.8
2,569,590	+				+0.0
2,569,590	+				+4.0
2,569,591	-				+1.1
2,569,591	-				+0.1
2,570,000	-		PP_2253	0.45	+1.8
2,570,295	+		PP_2253	0.89	-2.5
2,570,297	+		PP_2253	0.89	+1.5
2,570,411	-				+0.4
2,570,411	-				-0.8
2,570,661	+		PP_2254	0.40	+2.1
2,570,661	+		PP_2254	0.40	-0.7
2,570,661	+		PP_2254	0.40	+1.6
2,570,661	+		PP_2254	0.40	-0.3
2,570,661	+		PP_2254	0.40	+3.3
2,570,662	-		PP_2254	0.40	+1.3
2,570,662	-		PP_2254	0.40	+0.9
2,571,511	+		PP_2255	0.29	-2.5
2,571,511	+		PP_2255	0.29	-0.2
2,571,511	+		PP_2255	0.29	-1.7
2,571,512	-		PP_2255	0.29	+0.8
2,571,670	+		PP_2255	0.41	+0.1
2,571,671	-		PP_2255	0.42	-3.7
2,571,754	+		PP_2255	0.48	-0.2
2,571,755	-		PP_2255	0.48	+0.8
2,571,803	-		PP_2255	0.52	-3.7