Strain Fitness in Pseudomonas putida KT2440 around PP_3192

Experiment: pH 8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 8
3,620,549	+		PP_3191	0.19	-0.7
3,620,829	+		PP_3191	0.46	-1.2
3,620,866	+		PP_3191	0.49	+1.8
3,620,866	+		PP_3191	0.49	-1.9
3,620,866	+		PP_3191	0.49	-1.6
3,620,883	+		PP_3191	0.51	-0.4
3,621,013	+		PP_3191	0.63	-0.7
3,621,014	-		PP_3191	0.63	-1.3
3,621,014	-		PP_3191	0.63	-0.5
3,621,299	+				+0.1
3,621,300	-				+1.9
3,621,300	-				-1.0
3,621,300	-				+1.4
3,621,454	+				+2.9
3,621,455	-				+3.1
3,621,460	+				-2.2
3,621,500	-		PP_3192	0.11	+2.0
3,621,596	+		PP_3192	0.27	+1.1
3,621,760	+		PP_3192	0.54	+2.3
3,621,855	-		PP_3192	0.70	+0.5
3,621,923	+		PP_3192	0.81	+1.0
3,621,933	-		PP_3192	0.83	+3.1
3,621,955	-		PP_3192	0.86	-0.2
3,621,985	+				-0.6
3,622,043	-				+0.2
3,622,069	-				+1.2
3,622,069	-				-1.1
3,622,087	-				+2.8
3,622,157	-				+0.8
3,622,626	-		PP_3193	0.79	+3.3
3,622,752	+				-0.2
3,622,753	-				-0.8
3,622,804	-				-1.7
3,622,842	+				-2.2
3,622,842	+				-3.1
3,622,842	+				+0.8
3,622,843	-				+0.4
3,623,030	+		PP_3194	0.24	+0.5