Experiment: pH 8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PP_0742 and PP_0743 are separated by 186 nucleotides PP_0743 and PP_0744 are separated by 13 nucleotides
PP_0742: PP_0742 - conserved exported protein of unknown function, at 860,775 to 861,761
_0742
PP_0743: PP_0743 - conserved protein with NAD(P)-binding Rossmann-fold domain, at 861,948 to 862,853
_0743
PP_0744: PP_0744 - Ferrochelatase, at 862,867 to 863,883
_0744
Position (kb) 861
862
863 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 861.170 kb on + strand, within PP_0742 at 861.209 kb on + strand, within PP_0742 at 861.210 kb on - strand, within PP_0742 at 861.210 kb on - strand, within PP_0742 at 861.310 kb on + strand, within PP_0742 at 861.353 kb on - strand, within PP_0742 at 861.482 kb on + strand, within PP_0742 at 861.482 kb on + strand, within PP_0742 at 861.482 kb on + strand, within PP_0742 at 861.482 kb on + strand, within PP_0742 at 861.482 kb on + strand, within PP_0742 at 861.482 kb on + strand, within PP_0742 at 861.483 kb on - strand, within PP_0742 at 861.483 kb on - strand, within PP_0742 at 861.500 kb on - strand, within PP_0742 at 861.500 kb on - strand, within PP_0742 at 861.505 kb on + strand, within PP_0742 at 861.505 kb on + strand, within PP_0742 at 861.506 kb on - strand, within PP_0742 at 861.506 kb on - strand, within PP_0742 at 861.506 kb on - strand, within PP_0742 at 861.506 kb on - strand, within PP_0742 at 861.506 kb on - strand, within PP_0742 at 861.506 kb on - strand, within PP_0742 at 861.592 kb on + strand, within PP_0742 at 861.593 kb on - strand, within PP_0742 at 861.750 kb on - strand at 861.753 kb on + strand at 861.753 kb on + strand at 861.754 kb on - strand at 861.754 kb on - strand at 861.754 kb on - strand at 861.794 kb on + strand at 861.795 kb on - strand at 861.795 kb on - strand at 861.795 kb on - strand at 861.814 kb on + strand at 861.815 kb on - strand at 861.829 kb on - strand at 861.834 kb on + strand at 861.834 kb on + strand at 861.834 kb on + strand at 861.835 kb on - strand at 861.835 kb on - strand at 861.835 kb on - strand at 861.866 kb on + strand at 861.866 kb on + strand at 861.867 kb on - strand at 861.867 kb on - strand at 861.909 kb on + strand at 861.916 kb on - strand at 861.953 kb on + strand at 861.953 kb on + strand at 861.953 kb on + strand at 861.953 kb on + strand at 861.953 kb on + strand at 861.953 kb on + strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.954 kb on - strand at 861.955 kb on + strand at 861.955 kb on + strand at 861.955 kb on + strand at 861.955 kb on + strand at 861.955 kb on + strand at 861.955 kb on + strand at 861.955 kb on + strand at 861.955 kb on + strand at 861.955 kb on + strand at 861.956 kb on - strand at 861.956 kb on - strand at 861.956 kb on - strand at 861.956 kb on - strand at 861.956 kb on - strand at 862.108 kb on + strand, within PP_0743 at 862.108 kb on + strand, within PP_0743 at 862.109 kb on - strand, within PP_0743 at 862.109 kb on - strand at 862.109 kb on - strand, within PP_0743 at 862.300 kb on - strand, within PP_0743 at 862.373 kb on + strand, within PP_0743 at 862.374 kb on - strand, within PP_0743 at 862.417 kb on + strand, within PP_0743 at 862.417 kb on + strand, within PP_0743 at 862.418 kb on - strand, within PP_0743 at 862.426 kb on + strand, within PP_0743 at 862.427 kb on - strand, within PP_0743 at 862.427 kb on - strand, within PP_0743 at 862.550 kb on + strand, within PP_0743 at 862.551 kb on - strand, within PP_0743 at 862.551 kb on - strand, within PP_0743 at 862.552 kb on + strand, within PP_0743 at 862.553 kb on - strand, within PP_0743 at 862.553 kb on - strand, within PP_0743 at 862.611 kb on + strand, within PP_0743 at 862.612 kb on - strand, within PP_0743 at 862.612 kb on - strand, within PP_0743 at 862.612 kb on - strand, within PP_0743 at 862.612 kb on - strand, within PP_0743 at 862.612 kb on - strand, within PP_0743 at 862.613 kb on + strand, within PP_0743 at 862.613 kb on + strand, within PP_0743
Per-strain Table
Position Strand Gene LocusTag Fraction pH 8 remove 861,170 + PP_0742 0.40 -0.1 861,209 + PP_0742 0.44 -3.8 861,210 - PP_0742 0.44 +0.2 861,210 - PP_0742 0.44 +0.9 861,310 + PP_0742 0.54 -0.4 861,353 - PP_0742 0.59 +0.7 861,482 + PP_0742 0.72 +2.1 861,482 + PP_0742 0.72 -3.3 861,482 + PP_0742 0.72 +0.1 861,482 + PP_0742 0.72 -1.9 861,482 + PP_0742 0.72 +0.3 861,482 + PP_0742 0.72 -0.7 861,483 - PP_0742 0.72 +0.0 861,483 - PP_0742 0.72 +0.9 861,500 - PP_0742 0.73 -0.9 861,500 - PP_0742 0.73 +1.9 861,505 + PP_0742 0.74 -1.1 861,505 + PP_0742 0.74 -0.1 861,506 - PP_0742 0.74 +3.9 861,506 - PP_0742 0.74 +2.7 861,506 - PP_0742 0.74 -1.5 861,506 - PP_0742 0.74 -2.0 861,506 - PP_0742 0.74 -0.7 861,506 - PP_0742 0.74 -1.2 861,592 + PP_0742 0.83 +3.9 861,593 - PP_0742 0.83 -1.7 861,750 - +0.9 861,753 + -2.3 861,753 + -0.4 861,754 - -2.0 861,754 - +1.2 861,754 - +0.9 861,794 + -0.2 861,795 - -1.7 861,795 - +0.1 861,795 - -1.3 861,814 + +0.7 861,815 - +0.5 861,829 - +3.4 861,834 + -1.7 861,834 + +2.9 861,834 + -0.5 861,835 - -0.3 861,835 - -2.5 861,835 - +0.2 861,866 + +1.4 861,866 + -2.6 861,867 - +3.2 861,867 - -3.0 861,909 + +0.9 861,916 - -0.0 861,953 + +0.2 861,953 + +0.4 861,953 + +1.9 861,953 + -0.1 861,953 + +0.7 861,953 + -0.9 861,954 - +3.8 861,954 - +0.5 861,954 - +0.9 861,954 - +0.2 861,954 - +0.1 861,954 - +0.5 861,954 - +1.1 861,954 - +2.7 861,954 - +0.3 861,954 - +0.4 861,954 - -0.5 861,954 - -1.8 861,955 + -0.6 861,955 + -2.8 861,955 + -2.1 861,955 + -3.7 861,955 + +0.2 861,955 + +1.9 861,955 + +0.7 861,955 + -0.1 861,955 + -0.1 861,956 - -0.7 861,956 - +3.4 861,956 - -0.5 861,956 - +1.0 861,956 - +0.9 862,108 + PP_0743 0.18 -2.6 862,108 + PP_0743 0.18 +0.4 862,109 - PP_0743 0.18 +1.4 862,109 - +0.3 862,109 - PP_0743 0.18 -0.4 862,300 - PP_0743 0.39 +0.9 862,373 + PP_0743 0.47 -0.4 862,374 - PP_0743 0.47 -0.1 862,417 + PP_0743 0.52 +0.5 862,417 + PP_0743 0.52 +1.8 862,418 - PP_0743 0.52 +1.0 862,426 + PP_0743 0.53 +0.1 862,427 - PP_0743 0.53 -0.9 862,427 - PP_0743 0.53 -0.9 862,550 + PP_0743 0.66 +1.6 862,551 - PP_0743 0.67 +1.4 862,551 - PP_0743 0.67 -1.9 862,552 + PP_0743 0.67 -3.0 862,553 - PP_0743 0.67 +0.8 862,553 - PP_0743 0.67 +1.4 862,611 + PP_0743 0.73 -1.1 862,612 - PP_0743 0.73 -0.4 862,612 - PP_0743 0.73 -3.5 862,612 - PP_0743 0.73 +0.4 862,612 - PP_0743 0.73 +0.5 862,612 - PP_0743 0.73 +0.4 862,613 + PP_0743 0.73 +2.7 862,613 + PP_0743 0.73 -0.4
Or see this region's nucleotide sequence