Strain Fitness in Agrobacterium fabrum C58 around Atu8090

Experiment: tannic 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	tannic 1 mM
1,492,324	+				-0.4
1,492,350	-				+0.7
1,492,366	+				-0.3
1,492,397	-				+0.3
1,492,400	+				+0.9
1,492,483	+				+0.5
1,492,500	+				-0.3
1,492,509	+				-0.9
1,492,605	+		Atu1503	0.38	-1.9
1,492,783	+				-0.0
1,493,021	+				-0.1
1,493,055	-				+0.8
1,493,055	-				+0.1
1,493,102	-				+0.4
1,493,186	-				-0.2
1,493,204	-				+0.2
1,493,257	-		Atu8090	0.13	-0.1
1,493,376	+		Atu8090	0.30	+1.3
1,493,384	-		Atu8090	0.31	-0.8
1,493,423	+		Atu8090	0.36	+0.4
1,493,431	-		Atu8090	0.37	+0.7
1,493,431	-		Atu8090	0.37	+0.1
1,493,435	+		Atu8090	0.38	-2.8
1,493,443	-		Atu8090	0.39	+0.2
1,493,450	-		Atu8090	0.40	+0.2
1,493,535	+		Atu8090	0.52	-0.7
1,493,548	+		Atu8090	0.53	+0.1
1,493,563	+		Atu8090	0.56	-0.1
1,493,576	-		Atu8090	0.57	+0.2
1,493,686	+		Atu8090	0.73	-0.4
1,493,758	+		Atu8090	0.83	+0.8
1,493,887	+				-1.6
1,493,900	-				+0.2