Experiment: tannic 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3687 and Atu3688 are separated by 53 nucleotides Atu3688 and Atu3689 overlap by 4 nucleotides Atu3689 and Atu3690 overlap by 4 nucleotides Atu3690 and Atu3691 overlap by 8 nucleotides
Atu3687: Atu3687 - TonB-dependent receptor, at 760,897 to 763,335
Atu3687
Atu3688: Atu3688 - iron(III ABC transporter permease dicitrate ABC transporter permease, at 763,389 to 764,309
Atu3688
Atu3689: Atu3689 - iron(III ABC transporter permease dicitrate ABC transporter permease, at 764,306 to 765,355
Atu3689
Atu3690: Atu3690 - iron (III ABC transporter permease dicitrate ABC transporter permease, at 765,352 to 766,326
Atu3690
Atu3691: Atu3691 - iron (III) dicitrate ABC transporter ATPase, at 766,319 to 767,122
Atu3691
Position (kb) 764
765
766 Strain fitness (log2 ratio) -2
-1
0
1 at 763.453 kb on + strand at 763.476 kb on + strand at 763.484 kb on - strand, within Atu3688 at 763.484 kb on - strand, within Atu3688 at 763.609 kb on + strand, within Atu3688 at 763.628 kb on + strand, within Atu3688 at 763.950 kb on - strand, within Atu3688 at 764.071 kb on + strand, within Atu3688 at 764.378 kb on + strand at 764.448 kb on + strand, within Atu3689 at 764.449 kb on + strand, within Atu3689 at 764.462 kb on + strand, within Atu3689 at 764.464 kb on - strand, within Atu3689 at 764.470 kb on - strand, within Atu3689 at 764.564 kb on + strand, within Atu3689 at 764.834 kb on + strand, within Atu3689 at 764.837 kb on - strand, within Atu3689 at 764.866 kb on + strand, within Atu3689 at 764.960 kb on - strand, within Atu3689 at 765.000 kb on + strand, within Atu3689 at 765.008 kb on - strand, within Atu3689 at 765.050 kb on + strand, within Atu3689 at 765.099 kb on + strand, within Atu3689 at 765.107 kb on - strand, within Atu3689 at 765.107 kb on - strand, within Atu3689 at 765.290 kb on + strand at 765.298 kb on - strand at 765.414 kb on - strand at 765.419 kb on - strand at 765.419 kb on - strand at 765.577 kb on + strand, within Atu3690 at 765.785 kb on + strand, within Atu3690 at 765.785 kb on + strand, within Atu3690 at 765.785 kb on + strand, within Atu3690 at 765.785 kb on + strand, within Atu3690 at 765.785 kb on + strand, within Atu3690 at 765.793 kb on - strand, within Atu3690 at 765.893 kb on + strand, within Atu3690 at 765.898 kb on + strand, within Atu3690 at 766.010 kb on + strand, within Atu3690 at 766.023 kb on + strand, within Atu3690 at 766.104 kb on - strand, within Atu3690
Per-strain Table
Position Strand Gene LocusTag Fraction tannic 1 mM remove 763,453 + -0.2 763,476 + -2.6 763,484 - Atu3688 0.10 -1.1 763,484 - Atu3688 0.10 -0.5 763,609 + Atu3688 0.24 -1.1 763,628 + Atu3688 0.26 -0.7 763,950 - Atu3688 0.61 -1.4 764,071 + Atu3688 0.74 -0.9 764,378 + -0.2 764,448 + Atu3689 0.14 -1.0 764,449 + Atu3689 0.14 -0.6 764,462 + Atu3689 0.15 -0.6 764,464 - Atu3689 0.15 -0.6 764,470 - Atu3689 0.16 -0.8 764,564 + Atu3689 0.25 -1.7 764,834 + Atu3689 0.50 +0.2 764,837 - Atu3689 0.51 -0.4 764,866 + Atu3689 0.53 -0.0 764,960 - Atu3689 0.62 -0.1 765,000 + Atu3689 0.66 -0.5 765,008 - Atu3689 0.67 -1.3 765,050 + Atu3689 0.71 -0.8 765,099 + Atu3689 0.76 -0.5 765,107 - Atu3689 0.76 -0.3 765,107 - Atu3689 0.76 -0.8 765,290 + -0.1 765,298 - -0.8 765,414 - -0.5 765,419 - -0.6 765,419 - -0.5 765,577 + Atu3690 0.23 -0.3 765,785 + Atu3690 0.44 -0.5 765,785 + Atu3690 0.44 +0.5 765,785 + Atu3690 0.44 -0.2 765,785 + Atu3690 0.44 -1.1 765,785 + Atu3690 0.44 -0.5 765,793 - Atu3690 0.45 -0.6 765,893 + Atu3690 0.55 -1.0 765,898 + Atu3690 0.56 -1.7 766,010 + Atu3690 0.67 -0.2 766,023 + Atu3690 0.69 +0.2 766,104 - Atu3690 0.77 -0.7
Or see this region's nucleotide sequence