Experiment: tannic 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3451 and Atu3453 are separated by 424 nucleotides Atu3453 and Atu3454 are separated by 6 nucleotides Atu3454 and Atu3455 are separated by 81 nucleotides
Atu3451: Atu3451 - monooxygenase, at 499,522 to 500,550
Atu3451
Atu3453: Atu3453 - isomerase/lactonizing enzyme, at 500,975 to 502,123
Atu3453
Atu3454: Atu3454 - arylesterase, at 502,130 to 502,759
Atu3454
Atu3455: Atu3455 - oligopeptide ABC transporter substrate-binding protein, at 502,841 to 504,439
Atu3455
Position (kb) 500
501
502
503 Strain fitness (log2 ratio) -1
0
1 at 500.094 kb on - strand, within Atu3451 at 500.155 kb on + strand, within Atu3451 at 500.187 kb on + strand, within Atu3451 at 500.207 kb on - strand, within Atu3451 at 500.234 kb on + strand, within Atu3451 at 500.248 kb on + strand, within Atu3451 at 500.256 kb on - strand, within Atu3451 at 500.340 kb on + strand, within Atu3451 at 500.404 kb on + strand, within Atu3451 at 500.465 kb on + strand at 500.475 kb on + strand at 500.587 kb on + strand at 500.595 kb on - strand at 500.619 kb on - strand at 500.758 kb on - strand at 500.763 kb on + strand at 500.998 kb on - strand at 501.049 kb on - strand at 501.199 kb on + strand, within Atu3453 at 501.219 kb on + strand, within Atu3453 at 501.233 kb on - strand, within Atu3453 at 501.252 kb on - strand, within Atu3453 at 501.259 kb on + strand, within Atu3453 at 501.289 kb on - strand, within Atu3453 at 501.329 kb on + strand, within Atu3453 at 501.351 kb on - strand, within Atu3453 at 501.373 kb on - strand, within Atu3453 at 501.373 kb on - strand, within Atu3453 at 501.518 kb on + strand, within Atu3453 at 501.532 kb on + strand, within Atu3453 at 501.556 kb on - strand, within Atu3453 at 501.621 kb on + strand, within Atu3453 at 501.764 kb on + strand, within Atu3453 at 501.843 kb on + strand, within Atu3453 at 501.853 kb on + strand, within Atu3453 at 501.858 kb on - strand, within Atu3453 at 501.962 kb on - strand, within Atu3453 at 501.992 kb on + strand, within Atu3453 at 502.016 kb on - strand at 502.078 kb on - strand at 502.119 kb on + strand at 502.146 kb on + strand at 502.156 kb on + strand at 502.187 kb on + strand at 502.195 kb on - strand, within Atu3454 at 502.195 kb on - strand, within Atu3454 at 502.218 kb on - strand, within Atu3454 at 502.233 kb on - strand, within Atu3454 at 502.351 kb on + strand, within Atu3454 at 502.359 kb on - strand, within Atu3454 at 502.450 kb on + strand, within Atu3454 at 502.539 kb on - strand, within Atu3454 at 502.577 kb on + strand, within Atu3454 at 502.583 kb on - strand, within Atu3454 at 502.583 kb on - strand, within Atu3454 at 502.585 kb on + strand, within Atu3454 at 502.738 kb on + strand at 502.738 kb on + strand at 502.860 kb on + strand at 502.875 kb on - strand at 502.988 kb on - strand at 503.006 kb on + strand, within Atu3455 at 503.014 kb on - strand, within Atu3455 at 503.025 kb on - strand, within Atu3455 at 503.025 kb on - strand, within Atu3455 at 503.058 kb on + strand, within Atu3455 at 503.123 kb on - strand, within Atu3455
Per-strain Table
Position Strand Gene LocusTag Fraction tannic 1 mM remove 500,094 - Atu3451 0.56 +0.2 500,155 + Atu3451 0.62 -1.1 500,187 + Atu3451 0.65 -0.4 500,207 - Atu3451 0.67 +0.6 500,234 + Atu3451 0.69 +1.1 500,248 + Atu3451 0.71 +0.1 500,256 - Atu3451 0.71 +0.5 500,340 + Atu3451 0.79 +0.3 500,404 + Atu3451 0.86 +0.5 500,465 + +0.9 500,475 + -0.3 500,587 + -0.9 500,595 - +0.4 500,619 - -0.4 500,758 - +0.6 500,763 + -0.2 500,998 - +0.4 501,049 - -0.5 501,199 + Atu3453 0.19 -0.1 501,219 + Atu3453 0.21 -0.2 501,233 - Atu3453 0.22 -0.9 501,252 - Atu3453 0.24 +1.6 501,259 + Atu3453 0.25 -0.3 501,289 - Atu3453 0.27 +0.2 501,329 + Atu3453 0.31 +0.0 501,351 - Atu3453 0.33 +0.1 501,373 - Atu3453 0.35 +1.6 501,373 - Atu3453 0.35 +0.3 501,518 + Atu3453 0.47 +0.2 501,532 + Atu3453 0.48 +0.4 501,556 - Atu3453 0.51 -1.1 501,621 + Atu3453 0.56 -0.5 501,764 + Atu3453 0.69 +0.2 501,843 + Atu3453 0.76 +0.5 501,853 + Atu3453 0.76 -0.8 501,858 - Atu3453 0.77 -0.4 501,962 - Atu3453 0.86 +0.1 501,992 + Atu3453 0.89 +0.6 502,016 - +0.0 502,078 - -0.5 502,119 + -0.5 502,146 + -0.2 502,156 + -0.9 502,187 + +0.2 502,195 - Atu3454 0.10 +0.0 502,195 - Atu3454 0.10 +0.2 502,218 - Atu3454 0.14 -0.1 502,233 - Atu3454 0.16 -1.2 502,351 + Atu3454 0.35 +0.2 502,359 - Atu3454 0.36 -0.5 502,450 + Atu3454 0.51 -0.3 502,539 - Atu3454 0.65 +0.1 502,577 + Atu3454 0.71 +0.1 502,583 - Atu3454 0.72 +0.1 502,583 - Atu3454 0.72 +0.7 502,585 + Atu3454 0.72 -0.1 502,738 + -0.3 502,738 + -0.1 502,860 + +0.8 502,875 - +0.3 502,988 - -0.3 503,006 + Atu3455 0.10 -0.1 503,014 - Atu3455 0.11 +0.9 503,025 - Atu3455 0.12 -0.1 503,025 - Atu3455 0.12 -0.1 503,058 + Atu3455 0.14 -0.3 503,123 - Atu3455 0.18 -0.2
Or see this region's nucleotide sequence