Strain Fitness in Pseudomonas putida KT2440 around PP_5265

Experiment: pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 7
6,013,167	+				+0.8
6,013,168	-				+0.9
6,013,168	-				+0.1
6,013,168	-				-1.1
6,013,174	+				+1.9
6,013,175	-				-0.9
6,013,205	+				-2.6
6,013,205	+				-0.8
6,013,205	+				+0.2
6,013,205	+				-3.3
6,013,206	-				-3.0
6,013,206	-				-0.5
6,013,509	+		PP_5265	0.50	+1.9
6,013,509	+		PP_5265	0.50	+0.4
6,013,509	+		PP_5265	0.50	+0.3
6,013,510	-		PP_5265	0.50	+1.6
6,013,510	-		PP_5265	0.50	+2.3
6,013,511	+		PP_5265	0.50	+1.4
6,013,511	+		PP_5265	0.50	+1.7
6,013,511	+		PP_5265	0.50	+1.1
6,013,511	+		PP_5265	0.50	-0.4
6,013,511	+		PP_5265	0.50	+0.8
6,013,863	+				-0.0
6,013,863	+				-0.9
6,013,864	-				-1.2
6,013,864	-				+1.8
6,013,907	-				-1.2
6,013,907	-				-0.2
6,013,946	-				-1.8
6,013,958	+				+2.4
6,014,195	+		PP_5266	0.16	+2.4
6,014,354	-		PP_5266	0.24	+0.8
6,014,404	+		PP_5266	0.27	-0.4
6,014,404	+		PP_5266	0.27	+1.8
6,014,405	-		PP_5266	0.27	+0.8
6,014,405	-				+1.8
6,014,405	-		PP_5266	0.27	+0.6
6,014,512	+		PP_5266	0.33	-2.5
6,014,651	-				-0.9
6,014,729	-		PP_5266	0.44	+3.4
6,014,766	+		PP_5266	0.46	+5.4
6,014,766	+		PP_5266	0.46	-0.2
6,014,766	+		PP_5266	0.46	-1.4
6,014,766	+		PP_5266	0.46	+0.5
6,014,767	-		PP_5266	0.46	+1.1