Strain Fitness in Pseudomonas putida KT2440 around PP_4928

Experiment: pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 7
5,607,424	+		PP_4927	0.67	+0.1
5,607,425	-		PP_4927	0.67	+2.8
5,607,425	-		PP_4927	0.67	+0.5
5,607,438	+		PP_4927	0.68	+2.4
5,607,439	-		PP_4927	0.68	+0.5
5,607,439	-		PP_4927	0.68	+0.2
5,607,439	-		PP_4927	0.68	-0.4
5,607,442	+		PP_4927	0.68	-1.5
5,607,442	+		PP_4927	0.68	+0.4
5,607,442	+		PP_4927	0.68	+4.9
5,607,443	-		PP_4927	0.68	-1.2
5,607,545	+		PP_4927	0.73	-1.0
5,607,546	-		PP_4927	0.73	+3.6
5,607,631	-		PP_4927	0.77	+2.6
5,607,659	-		PP_4927	0.78	+0.1
5,607,659	-		PP_4927	0.78	+5.8
5,607,825	+		PP_4927	0.86	+0.9
5,607,826	-		PP_4927	0.86	+0.5
5,607,838	+		PP_4927	0.86	+0.2
5,607,839	-		PP_4927	0.86	-0.2
5,607,851	-		PP_4927	0.87	+0.8
5,607,935	+				+0.8
5,607,936	-				-0.5
5,608,101	-				-1.7
5,608,127	-				+0.8
5,608,140	-				-0.3
5,608,260	-				+0.6
5,608,285	+				+0.8
5,608,285	+				+1.1
5,608,286	-				-1.1
5,608,315	+				+0.6
5,608,316	-				-0.2
5,608,316	-				-2.5
5,608,324	+				+0.5
5,609,582	-				+0.8
5,609,605	-				-0.6
5,609,754	+		PP_4929	0.16	+1.0
5,609,754	+		PP_4929	0.16	-1.5
5,609,754	+		PP_4929	0.16	-0.2
5,609,755	-		PP_4929	0.16	-0.9
5,609,763	+		PP_4929	0.17	+0.3
5,609,829	+		PP_4929	0.24	-2.0
5,609,829	+		PP_4929	0.24	+1.0
5,609,850	-		PP_4929	0.27	-0.2
5,610,553	+				+1.8
5,610,553	+				+0.5
5,610,553	+				+0.8
5,610,553	+				-0.4
5,610,554	-				+2.0
5,610,595	+				+0.0
5,610,596	-				-1.3
5,610,597	+				+1.8
5,610,597	+				+0.4
5,610,597	+				-1.5
5,610,597	+				-3.7
5,610,597	+				-0.1