Strain Fitness in Pseudomonas putida KT2440 around PP_4925

Experiment: pH 7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 7
5,602,504	+		PP_4924	0.82	+1.1
5,602,504	+		PP_4924	0.82	-0.8
5,602,505	-		PP_4924	0.82	+1.1
5,602,505	-		PP_4924	0.82	-1.8
5,602,553	+		PP_4924	0.83	+2.8
5,602,554	-		PP_4924	0.83	-2.0
5,602,852	-		PP_4924	0.88	-2.8
5,602,890	+		PP_4924	0.89	-1.0
5,602,891	-		PP_4924	0.89	-0.7
5,602,891	-		PP_4924	0.89	-0.3
5,602,969	+				-1.7
5,603,408	+				+0.2
5,603,408	+				+0.8
5,603,428	-				+0.9
5,603,428	-				-0.4
5,603,541	-				+0.8
5,603,629	+		PP_4925	0.19	+1.7
5,603,668	+		PP_4925	0.23	+2.2
5,603,788	-		PP_4925	0.38	+0.8
5,603,812	+		PP_4925	0.41	+3.6
5,603,875	-		PP_4925	0.49	+1.8
5,603,888	+		PP_4925	0.51	-3.2
5,603,909	-		PP_4925	0.53	-1.8
5,603,947	+		PP_4925	0.58	+0.8
5,603,948	-		PP_4925	0.58	+0.8
5,604,266	+				-0.4
5,604,272	+				-2.0
5,604,278	+				-0.4
5,604,460	-				-1.5
5,604,498	-				+2.4
5,604,501	+				-2.8
5,604,501	+				-0.2
5,604,518	+				-0.9
5,604,587	+				+1.5
5,604,700	+		PP_4926	0.12	-0.5
5,604,717	-		PP_4926	0.13	-1.2
5,604,772	+		PP_4926	0.17	-1.0
5,604,779	+		PP_4926	0.18	+0.2
5,604,779	+		PP_4926	0.18	+0.8
5,604,836	+		PP_4926	0.22	-0.0
5,604,914	+		PP_4926	0.27	+0.5
5,604,933	-		PP_4926	0.29	+0.8
5,604,978	+		PP_4926	0.32	+0.8
5,604,979	-		PP_4926	0.32	-0.4
5,605,204	+		PP_4926	0.48	-1.9
5,605,204	+		PP_4926	0.48	-1.7
5,605,204	+		PP_4926	0.48	+0.7
5,605,204	+		PP_4926	0.48	+0.9
5,605,205	-		PP_4926	0.48	+0.8
5,605,205	-		PP_4926	0.48	-0.8