Strain Fitness in Pseudomonas putida KT2440 around PP_2906

Experiment: pH 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 6
3,304,780	+				+0.0
3,304,788	+				-1.0
3,304,788	+				+0.8
3,304,788	+				+0.7
3,304,788	+				-2.0
3,304,789	-				+0.2
3,304,789	-				-0.5
3,304,812	+				+0.8
3,304,813	-				-1.7
3,304,940	-		PP_2906	0.12	-1.0
3,304,980	-		PP_2906	0.14	-0.9
3,305,010	+		PP_2906	0.17	-2.0
3,305,011	-		PP_2906	0.17	+1.8
3,305,212	-		PP_2906	0.31	-1.0
3,305,601	+		PP_2906	0.59	-0.6
3,305,603	+		PP_2906	0.59	-1.7
3,305,604	-		PP_2906	0.59	-0.9
3,305,604	-		PP_2906	0.59	+0.3
3,305,696	+		PP_2906	0.66	-1.1
3,305,696	+		PP_2906	0.66	-0.5
3,305,697	-		PP_2906	0.66	+3.2
3,305,757	+		PP_2906	0.70	+3.2
3,305,757	+		PP_2906	0.70	-3.2
3,305,757	+		PP_2906	0.70	+0.8
3,306,044	-				+0.8
3,306,062	-				+1.2
3,306,132	-				+0.8
3,306,132	-				+0.4
3,306,149	+				-0.4
3,306,190	-				-1.1
3,306,360	-		PP_2907	0.31	-1.2
3,306,360	-		PP_2907	0.31	+0.8
3,306,463	+		PP_2907	0.46	+1.1
3,306,484	+		PP_2907	0.49	-3.3
3,306,484	+		PP_2907	0.49	+0.8
3,306,609	+		PP_2907	0.68	-2.3
3,306,846	+				+1.0
3,306,846	+				+0.5
3,306,846	+				-1.0
3,306,847	-				-0.3
3,306,904	+				-0.5
3,307,123	+		PP_2908	0.32	-1.5
3,307,124	-				-3.3