Strain Fitness in Agrobacterium fabrum C58 around Atu6040

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
48,932	+		Atu6038	0.74	-2.1
48,932	+		Atu6038	0.74	-0.1
48,940	-		Atu6038	0.74	-0.3
48,945	-		Atu6038	0.75	+0.2
48,975	+		Atu6038	0.76	+0.3
49,023	+		Atu6038	0.78	-1.2
49,102	-		Atu6038	0.81	-0.0
49,150	-		Atu6038	0.83	+0.5
49,161	+		Atu6038	0.83	+0.3
49,170	+		Atu6038	0.84	+0.1
49,176	+		Atu6038	0.84	-0.2
49,179	-		Atu6038	0.84	+0.7
49,205	-		Atu6038	0.85	+0.2
49,205	-		Atu6038	0.85	+0.1
49,355	-				-0.0
49,355	-				+0.1
49,506	+				+0.2
49,514	-				-0.4
49,514	-				-0.3
49,526	-				+0.2
49,547	+				+0.2
49,653	-		Atu6039	0.23	-0.2
49,757	+		Atu6039	0.58	-0.2
49,784	+		Atu6039	0.67	+0.2
49,837	-		Atu6039	0.85	+0.1
49,869	-				+0.1
49,870	-				-0.4
49,876	+				-0.0
49,954	-		Atu6040	0.20	+0.2
49,980	-		Atu6040	0.26	+1.2
49,985	-		Atu6040	0.27	+0.3
49,994	+		Atu6040	0.30	+0.1
50,006	+		Atu6040	0.33	+0.0
50,012	-		Atu6040	0.34	+0.6
50,019	+		Atu6040	0.36	+0.2
50,054	+		Atu6040	0.45	+0.8
50,191	-		Atu6040	0.79	+0.0
50,193	+		Atu6040	0.79	-0.2
50,260	-				+0.2
50,302	+				+0.8
50,309	+				+0.7
50,317	-				-0.3
50,317	-				-0.4
50,369	-		Atu6041	0.11	-0.2
50,450	-		Atu6041	0.19	-0.3
50,494	-		Atu6041	0.23	-0.3
50,527	+		Atu6041	0.27	-0.0
50,534	+		Atu6041	0.28	-0.1
50,534	+		Atu6041	0.28	-0.2
50,534	+		Atu6041	0.28	+0.0
50,542	-		Atu6041	0.28	+0.5
50,568	+		Atu6041	0.31	+0.0
50,579	-		Atu6041	0.32	-2.7
50,650	-		Atu6041	0.40	-0.1
50,658	-		Atu6041	0.40	-0.2
50,688	-		Atu6041	0.43	+0.1
50,760	+		Atu6041	0.51	+0.6
50,763	-		Atu6041	0.51	-2.0
50,765	+		Atu6041	0.51	+0.4
50,773	-		Atu6041	0.52	-0.4
50,800	+		Atu6041	0.55	+0.5
50,824	+		Atu6041	0.57	+0.0
50,831	+		Atu6041	0.58	+0.1
50,832	-		Atu6041	0.58	+0.0
50,832	-		Atu6041	0.58	-0.3
50,839	-		Atu6041	0.59	-0.1
50,839	-		Atu6041	0.59	-0.2
50,855	+		Atu6041	0.61	-0.5
50,855	+		Atu6041	0.61	-0.8
50,887	-		Atu6041	0.64	-0.3
51,062	+		Atu6041	0.82	+0.2
51,067	+		Atu6041	0.82	+0.1
51,075	-		Atu6041	0.83	+0.1
51,075	-		Atu6041	0.83	-0.3
51,075	-		Atu6041	0.83	-0.6
51,175	-				+0.3
51,190	+				+0.0
51,190	+				-0.1
51,190	+				+0.6
51,226	+				+0.5
51,252	-				-0.5
51,252	-				+0.4
51,254	+				+0.1
51,275	+				+0.2