Strain Fitness in Agrobacterium fabrum C58 around Atu4677

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,835,683	-		Atu4676	0.12	-0.7
1,835,713	+		Atu4676	0.15	-0.2
1,835,721	-		Atu4676	0.16	+0.5
1,835,721	-		Atu4676	0.16	+0.2
1,835,833	+		Atu4676	0.26	+0.5
1,835,833	+		Atu4676	0.26	-0.2
1,835,841	-		Atu4676	0.27	+0.6
1,835,841	-		Atu4676	0.27	-0.1
1,835,921	+		Atu4676	0.35	-0.0
1,836,163	-		Atu4676	0.58	-0.3
1,836,202	+		Atu4676	0.62	+0.1
1,836,216	+		Atu4676	0.63	+0.1
1,836,347	-		Atu4676	0.76	-0.4
1,836,347	-		Atu4676	0.76	-0.3
1,836,395	+		Atu4676	0.81	-0.2
1,836,442	+		Atu4676	0.85	+0.3
1,836,509	-				-0.1
1,836,572	+				-0.2
1,836,580	-				+0.4
1,836,652	+				+0.8
1,836,700	-		Atu4677	0.16	+1.4
1,836,708	+		Atu4677	0.20	+0.4
1,836,970	+				+0.9
1,836,970	+				-0.2
1,837,236	-		Atu4678	0.40	+1.4
1,837,248	-		Atu4678	0.41	-0.2
1,837,324	-		Atu4678	0.51	+0.1
1,837,332	+		Atu4678	0.52	-1.3
1,837,372	+		Atu4678	0.57	-0.1
1,837,387	+		Atu4678	0.59	-1.0
1,837,413	-		Atu4678	0.62	-0.2
1,837,413	-		Atu4678	0.62	+0.0
1,837,413	-		Atu4678	0.62	+0.5
1,837,454	+		Atu4678	0.67	+0.1
1,837,472	+		Atu4678	0.69	-0.3
1,837,480	-		Atu4678	0.70	-1.2
1,837,499	+		Atu4678	0.72	-0.4
1,837,499	+		Atu4678	0.72	-0.3
1,837,499	+		Atu4678	0.72	-0.2
1,837,524	-		Atu4678	0.76	+0.1
1,837,547	+		Atu4678	0.78	+0.1
1,837,616	-		Atu4678	0.87	-0.4