Strain Fitness in Agrobacterium fabrum C58 around Atu4524

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,670,117	+				+0.1
1,670,167	+				-0.2
1,670,242	+				+0.1
1,670,242	+				-0.5
1,670,250	-				-0.2
1,670,316	-		Atu4523	0.11	-0.1
1,670,352	-		Atu4523	0.16	+0.1
1,670,387	+		Atu4523	0.20	-0.1
1,670,392	+		Atu4523	0.20	+0.4
1,670,450	+		Atu4523	0.27	+0.2
1,670,476	+		Atu4523	0.30	-0.2
1,670,583	-		Atu4523	0.43	+0.7
1,670,645	-		Atu4523	0.50	+1.4
1,670,679	-		Atu4523	0.54	-0.7
1,670,883	-		Atu4523	0.78	+0.2
1,670,937	+		Atu4523	0.85	+0.3
1,670,941	+		Atu4523	0.85	+0.6
1,670,960	+		Atu4523	0.87	-0.1
1,670,960	-		Atu4523	0.87	-0.1
1,670,997	+				+0.4
1,671,240	-		Atu4524	0.21	+0.7
1,671,253	+		Atu4524	0.23	+0.6
1,671,333	-		Atu4524	0.33	+0.5
1,671,343	-		Atu4524	0.34	+0.1
1,671,358	+		Atu4524	0.36	+1.3
1,671,445	+		Atu4524	0.47	+0.0
1,671,469	+		Atu4524	0.50	-0.2
1,671,572	+		Atu4524	0.63	-0.3
1,671,715	-		Atu4524	0.81	+0.2
1,671,729	+		Atu4524	0.82	+1.2
1,671,729	+		Atu4524	0.82	+0.6
1,671,825	+				-0.3
1,672,143	+				+0.3
1,672,151	-				+1.0
1,672,355	-		Atu4525	0.17	-0.7
1,672,410	+		Atu4525	0.21	-0.8
1,672,418	-		Atu4525	0.21	+0.4
1,672,622	-		Atu4525	0.35	+0.1
1,672,739	-		Atu4525	0.42	-0.2
1,672,790	-		Atu4525	0.46	+0.0
1,672,790	-		Atu4525	0.46	+0.1
1,672,868	+		Atu4525	0.51	+0.5