Strain Fitness in Agrobacterium fabrum C58 around Atu4133

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,252,131	+		Atu4132	0.32	+0.1
1,252,248	+		Atu4132	0.44	+0.5
1,252,362	-		Atu4132	0.55	-0.4
1,252,438	+		Atu4132	0.62	-0.7
1,252,580	+		Atu4132	0.75	-0.4
1,252,588	-		Atu4132	0.76	-0.1
1,252,588	-		Atu4132	0.76	+0.2
1,252,799	-				-0.3
1,252,817	-				+0.0
1,253,028	-		Atu4133	0.54	-1.7
1,253,098	+		Atu4133	0.77	-0.4
1,253,098	-		Atu4133	0.77	-0.6
1,253,108	+		Atu4133	0.81	+0.1
1,253,136	+				+0.2
1,253,136	+				+0.4
1,253,168	-				-0.2
1,253,218	+				-0.4
1,253,250	-				+0.2
1,253,295	-				+0.0
1,253,337	+		Atu4134	0.12	-0.0
1,253,337	+		Atu4134	0.12	-0.9
1,253,385	-		Atu4134	0.23	+0.4
1,253,387	+		Atu4134	0.24	-0.6
1,253,527	+		Atu4134	0.58	+0.1
1,253,561	-		Atu4134	0.66	+0.4
1,253,648	+		Atu4134	0.88	+0.6
1,253,818	+				-0.6
1,253,828	+				+0.1
1,253,833	+				+0.3
1,253,833	+				-0.2
1,253,833	+				+0.2
1,253,843	+				-0.3
1,253,854	+				-0.1
1,253,946	+				+0.2
1,253,961	-				+0.1
1,253,990	+				-0.1
1,253,998	-				+0.1
1,253,998	-				-0.2