Strain Fitness in Agrobacterium fabrum C58 around Atu4070

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,186,091	-		Atu4069	0.67	+0.1
1,186,101	-		Atu4069	0.67	-0.7
1,186,139	-		Atu4069	0.68	-0.3
1,186,380	+		Atu4069	0.77	+0.2
1,186,471	+		Atu4069	0.80	+1.2
1,186,471	+		Atu4069	0.80	+0.0
1,186,479	-		Atu4069	0.80	+0.4
1,186,566	+		Atu4069	0.83	-0.3
1,186,584	+		Atu4069	0.83	+1.2
1,186,648	+		Atu4069	0.86	-1.2
1,186,710	+		Atu4069	0.88	+0.1
1,186,772	-		Atu4069	0.90	-0.2
1,186,857	-				+0.5
1,186,900	+				+0.5
1,186,984	-				+0.2
1,187,259	+		Atu4070	0.35	+0.5
1,187,284	+		Atu4070	0.39	+0.5
1,187,472	+		Atu4070	0.73	-0.1
1,187,535	-		Atu4070	0.84	+0.1
1,187,646	-				-0.1
1,187,680	+				+0.3
1,187,736	-		Atu4071	0.11	+2.2
1,187,826	-		Atu4071	0.20	-0.3
1,187,836	+		Atu4071	0.21	+1.4
1,187,853	+		Atu4071	0.23	-0.1
1,187,960	+		Atu4071	0.33	-0.2
1,187,968	-		Atu4071	0.34	-0.3
1,187,974	-		Atu4071	0.34	+0.1
1,187,986	+		Atu4071	0.35	-0.0
1,188,015	-		Atu4071	0.38	+0.5
1,188,039	+		Atu4071	0.40	+0.0
1,188,066	-		Atu4071	0.43	+0.1
1,188,066	-		Atu4071	0.43	-0.1
1,188,314	+		Atu4071	0.67	+0.1
1,188,515	+		Atu4071	0.86	+0.0
1,188,515	+		Atu4071	0.86	-0.4
1,188,614	-				+0.2