Experiment: Mandelic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu3719 and Atu3720 overlap by 1 nucleotides Atu3720 and Atu3721 are separated by 35 nucleotides Atu3721 and Atu3722 are separated by 52 nucleotides
Atu3719: Atu3719 - MutT/nudix family protein, at 800,919 to 801,446
Atu3719
Atu3720: Atu3720 - hypothetical protein, at 801,446 to 802,024
Atu3720
Atu3721: Atu3721 - hypothetical protein, at 802,060 to 802,278
Atu3721
Atu3722: Atu3722 - Holliday junction DNA helicase RuvB, at 802,331 to 803,371
Atu3722
Position (kb) 802
803 Strain fitness (log2 ratio) -1
0
1 at 801.165 kb on - strand, within Atu3719 at 801.196 kb on + strand, within Atu3719 at 801.196 kb on + strand, within Atu3719 at 801.204 kb on - strand, within Atu3719 at 801.204 kb on - strand, within Atu3719 at 801.204 kb on - strand, within Atu3719 at 801.204 kb on - strand, within Atu3719 at 801.207 kb on - strand, within Atu3719 at 801.222 kb on - strand, within Atu3719 at 801.222 kb on - strand, within Atu3719 at 801.227 kb on - strand, within Atu3719 at 801.229 kb on - strand, within Atu3719 at 801.443 kb on + strand at 801.451 kb on - strand at 801.456 kb on - strand at 801.521 kb on - strand, within Atu3720 at 801.581 kb on - strand, within Atu3720 at 801.652 kb on + strand, within Atu3720 at 801.665 kb on - strand, within Atu3720 at 801.681 kb on + strand, within Atu3720 at 801.728 kb on + strand, within Atu3720 at 801.743 kb on + strand, within Atu3720 at 801.747 kb on + strand, within Atu3720 at 801.764 kb on + strand, within Atu3720 at 801.861 kb on + strand, within Atu3720 at 801.861 kb on + strand, within Atu3720 at 801.861 kb on + strand, within Atu3720 at 801.861 kb on + strand, within Atu3720 at 801.869 kb on - strand, within Atu3720 at 801.869 kb on - strand, within Atu3720 at 801.877 kb on + strand, within Atu3720 at 801.877 kb on + strand, within Atu3720 at 801.882 kb on + strand, within Atu3720 at 801.951 kb on - strand, within Atu3720 at 801.956 kb on - strand, within Atu3720 at 802.003 kb on + strand at 802.022 kb on - strand at 802.106 kb on + strand, within Atu3721 at 802.129 kb on + strand, within Atu3721 at 802.290 kb on + strand at 802.358 kb on - strand at 802.764 kb on + strand, within Atu3722
Per-strain Table
Position Strand Gene LocusTag Fraction Mandelic 5 mM remove 801,165 - Atu3719 0.47 -0.3 801,196 + Atu3719 0.52 +0.1 801,196 + Atu3719 0.52 +0.1 801,204 - Atu3719 0.54 -1.0 801,204 - Atu3719 0.54 +0.0 801,204 - Atu3719 0.54 -0.0 801,204 - Atu3719 0.54 +0.1 801,207 - Atu3719 0.55 +1.1 801,222 - Atu3719 0.57 -1.0 801,222 - Atu3719 0.57 -0.4 801,227 - Atu3719 0.58 -0.2 801,229 - Atu3719 0.59 -0.3 801,443 + +0.0 801,451 - +0.3 801,456 - +0.1 801,521 - Atu3720 0.13 -0.1 801,581 - Atu3720 0.23 +0.3 801,652 + Atu3720 0.36 -0.5 801,665 - Atu3720 0.38 -0.1 801,681 + Atu3720 0.41 -0.1 801,728 + Atu3720 0.49 -0.2 801,743 + Atu3720 0.51 +0.3 801,747 + Atu3720 0.52 +0.1 801,764 + Atu3720 0.55 +0.4 801,861 + Atu3720 0.72 +0.4 801,861 + Atu3720 0.72 -0.2 801,861 + Atu3720 0.72 +0.1 801,861 + Atu3720 0.72 +0.2 801,869 - Atu3720 0.73 +0.3 801,869 - Atu3720 0.73 -0.1 801,877 + Atu3720 0.74 -0.0 801,877 + Atu3720 0.74 -1.1 801,882 + Atu3720 0.75 +0.0 801,951 - Atu3720 0.87 -0.9 801,956 - Atu3720 0.88 -0.0 802,003 + +1.3 802,022 - -0.0 802,106 + Atu3721 0.21 -0.1 802,129 + Atu3721 0.32 +1.0 802,290 + +0.3 802,358 - -0.4 802,764 + Atu3722 0.42 +0.4
Or see this region's nucleotide sequence