Strain Fitness in Agrobacterium fabrum C58 around Atu3497

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
547,635	+		Atu3495	0.86	+2.7
547,826	-				-0.0
547,877	-				+0.2
547,883	-				+0.0
548,113	-		Atu3496	0.39	+0.3
548,232	-		Atu3496	0.63	-0.1
548,404	-				-0.4
548,624	-				-0.4
548,827	-		Atu3497	0.65	+3.4
548,907	-		Atu3497	0.88	+0.3
548,988	+				+0.4
548,988	+				-0.6
548,988	+				-0.2
548,998	+				+0.7
549,009	-				+1.0
549,025	-				+0.0
549,030	-				-0.2
549,061	+				+0.3
549,183	+		Atu3498	0.12	+1.8
549,243	+		Atu3498	0.16	-0.2
549,251	-		Atu3498	0.16	-0.4
549,273	-		Atu3498	0.18	+0.1
549,298	+		Atu3498	0.20	-0.3
549,381	+		Atu3498	0.25	-0.1
549,389	-		Atu3498	0.26	-0.8
549,389	-		Atu3498	0.26	+0.1
549,391	+		Atu3498	0.26	-0.2
549,495	+		Atu3498	0.33	+0.2
549,529	+		Atu3498	0.36	+0.6
549,622	-		Atu3498	0.42	-0.0
549,628	+		Atu3498	0.43	+0.0
549,628	+		Atu3498	0.43	-0.6
549,636	-		Atu3498	0.43	-0.1
549,722	+		Atu3498	0.49	+1.4
549,775	-		Atu3498	0.53	+0.4
549,778	+		Atu3498	0.53	+0.1
549,883	-		Atu3498	0.60	-0.7
549,901	-		Atu3498	0.62	-0.2
549,923	-		Atu3498	0.63	+0.5