Strain Fitness in Agrobacterium fabrum C58 around Atu3106

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
113,435	-		Atu3105	0.22	-0.6
113,478	-		Atu3105	0.27	-0.7
113,533	-		Atu3105	0.33	-0.3
113,599	+		Atu3105	0.40	+0.4
113,731	-		Atu3105	0.54	-0.4
113,731	-		Atu3105	0.54	-0.0
113,731	-		Atu3105	0.54	+0.3
113,961	+		Atu3105	0.79	-1.1
113,998	-		Atu3105	0.83	-0.3
114,094	-				-0.0
114,213	+				-0.0
114,220	-				-0.4
114,220	-				+0.1
114,268	-				+0.3
114,376	-				+0.1
114,486	-		Atu3106	0.10	-0.1
114,560	+		Atu3106	0.16	-0.0
114,722	-		Atu3106	0.29	-0.0
114,722	-		Atu3106	0.29	+0.2
114,819	-		Atu3106	0.36	-0.2
114,819	-		Atu3106	0.36	-1.4
114,888	-		Atu3106	0.42	+0.0
115,069	+		Atu3106	0.56	-0.8
115,077	-		Atu3106	0.56	-0.7
115,077	-		Atu3106	0.56	-0.8
115,319	-		Atu3106	0.75	-0.1
115,427	-		Atu3106	0.84	-1.1
115,613	+				-0.1
115,816	+				+0.4
115,816	+				-0.5
115,816	+				-0.6
115,885	-		Atu3107	0.12	+0.6
116,048	+		Atu3107	0.27	-0.5
116,144	+		Atu3107	0.37	-0.1
116,201	+		Atu3107	0.42	-0.6
116,207	-		Atu3107	0.42	-0.5
116,209	-		Atu3107	0.43	+0.4
116,245	+		Atu3107	0.46	+0.9
116,255	+		Atu3107	0.47	-0.1
116,263	-		Atu3107	0.48	+0.4
116,435	-		Atu3107	0.64	+0.4
116,445	-		Atu3107	0.65	+0.2
116,447	+		Atu3107	0.65	-0.0
116,447	+		Atu3107	0.65	+0.2
116,447	+		Atu3107	0.65	-0.0
116,493	+		Atu3107	0.69	+0.3
116,547	+		Atu3107	0.74	+0.7
116,608	+		Atu3107	0.80	-0.1
116,616	-		Atu3107	0.81	+0.2