Strain Fitness in Agrobacterium fabrum C58 around Atu2789

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
2,790,278	+				-0.6
2,790,344	-		Atu2788	0.13	-0.3
2,790,438	-		Atu2788	0.24	+0.3
2,790,448	-		Atu2788	0.25	-0.7
2,790,453	-		Atu2788	0.25	+0.3
2,790,592	-		Atu2788	0.41	+0.2
2,790,609	-		Atu2788	0.43	-0.0
2,790,718	+		Atu2788	0.55	-0.8
2,790,718	+		Atu2788	0.55	+0.7
2,790,843	+		Atu2788	0.69	+0.1
2,790,873	+		Atu2788	0.73	-0.3
2,791,092	-				-1.0
2,791,225	-				+0.1
2,791,240	+				+0.0
2,791,263	-				+0.3
2,791,386	-		Atu2789	0.59	+0.6
2,791,390	+		Atu2789	0.61	+0.9
2,791,419	+		Atu2789	0.73	-0.0
2,791,419	+		Atu2789	0.73	+0.1
2,791,499	+				-0.0
2,791,507	-				-0.4
2,791,522	+				-0.7
2,791,670	-				+0.2
2,791,761	-		Atu2790	0.19	-0.4
2,791,832	-		Atu2790	0.31	+0.1
2,792,381	-				-0.2
2,792,391	-				+0.0
2,792,440	+				+1.1