Strain Fitness in Agrobacterium fabrum C58 around Atu2294

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
2,267,646	-				-0.3
2,267,681	-				-1.0
2,267,744	+				+0.1
2,267,763	+				+0.4
2,267,771	-				+0.3
2,267,771	-				-0.8
2,267,771	-				-0.5
2,267,789	+				+0.6
2,267,790	+				+0.0
2,267,891	+				-0.0
2,268,161	+		Atu2293	0.52	-0.0
2,268,237	+		Atu2293	0.66	-0.1
2,268,277	+		Atu2293	0.73	-0.7
2,268,386	+				-2.5
2,268,449	-				-1.1
2,268,710	-		Atu2294	0.15	+0.1
2,268,777	+		Atu2294	0.29	+0.5
2,268,785	-		Atu2294	0.31	+1.1
2,268,854	+		Atu2294	0.46	+0.3
2,268,942	-		Atu2294	0.65	+0.2
2,269,156	+				-0.2
2,269,159	+				+0.6
2,269,167	-				-2.3
2,269,167	-				+0.2
2,269,169	+				-1.3
2,269,212	-				+0.1
2,269,276	+		Atu2295	0.10	+0.4
2,269,317	+		Atu2295	0.13	-0.1
2,269,341	-		Atu2295	0.14	-1.1
2,269,365	+		Atu2295	0.16	-0.5
2,269,420	+		Atu2295	0.19	+0.2
2,269,449	-		Atu2295	0.21	-0.2
2,269,464	-		Atu2295	0.22	-0.1
2,269,482	-		Atu2295	0.23	+0.2
2,269,538	+		Atu2295	0.26	-0.0
2,269,743	-		Atu2295	0.38	+0.4
2,269,761	+		Atu2295	0.39	+0.5
2,269,897	+		Atu2295	0.48	+0.0
2,269,932	-		Atu2295	0.50	-0.3