Strain Fitness in Agrobacterium fabrum C58 around Atu2125
Experiment: Mandelic 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Mandelic 5 mM |
---|---|---|---|---|---|
remove | |||||
2,088,603 | - | Atu2124 | 0.30 | -0.1 | |
2,088,603 | - | Atu2124 | 0.30 | -0.7 | |
2,088,740 | - | Atu2124 | 0.43 | -0.3 | |
2,088,922 | - | Atu2124 | 0.61 | -1.2 | |
2,089,007 | - | Atu2124 | 0.69 | +0.1 | |
2,089,026 | - | Atu2124 | 0.71 | -0.2 | |
2,089,755 | - | Atu2125 | 0.17 | -1.3 | |
2,090,034 | - | Atu2125 | 0.34 | -1.1 | |
2,090,153 | - | Atu2125 | 0.41 | -0.2 |
Or see this region's nucleotide sequence