Strain Fitness in Agrobacterium fabrum C58 around Atu2081

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
2,038,872	-		Atu2079	0.72	-0.1
2,038,879	+		Atu2079	0.73	+0.7
2,038,887	-		Atu2079	0.74	-0.0
2,038,889	+		Atu2079	0.74	+0.7
2,038,924	-		Atu2079	0.78	-0.1
2,039,057	-				+0.2
2,039,069	+				+0.1
2,039,261	+				+0.1
2,039,290	+				-1.7
2,039,292	+				-0.0
2,039,312	-				+0.6
2,039,359	+				+0.6
2,039,367	-		Atu2080	0.11	-0.6
2,039,367	-		Atu2080	0.11	-1.1
2,039,387	-		Atu2080	0.15	+0.1
2,039,414	-		Atu2080	0.20	-0.5
2,039,419	-		Atu2080	0.21	-0.3
2,039,666	-		Atu2080	0.67	-1.4
2,039,777	+		Atu2080	0.88	-0.2
2,039,957	+		Atu2081	0.13	+0.7
2,039,963	-		Atu2081	0.13	+0.2
2,040,088	+		Atu2081	0.27	+0.3
2,040,132	+		Atu2081	0.32	-0.1
2,040,167	+		Atu2081	0.36	+0.3
2,040,271	+		Atu2081	0.48	+0.6
2,040,271	+		Atu2081	0.48	+0.1
2,040,277	-		Atu2081	0.48	+0.5
2,040,336	+		Atu2081	0.55	-0.2
2,040,344	-		Atu2081	0.56	-0.3
2,040,488	-		Atu2081	0.72	+0.9
2,040,521	+		Atu2081	0.76	+1.3
2,040,529	-		Atu2081	0.77	+1.5
2,040,529	-		Atu2081	0.77	-0.2
2,040,650	-				-0.3
2,040,708	+				-0.2
2,040,742	-				-0.3
2,040,774	+				-0.1
2,040,774	+				-0.2
2,040,779	+				+0.6
2,040,782	-				-0.3