Strain Fitness in Agrobacterium fabrum C58 around Atu1904

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,880,773	+		Atu1903	0.39	-0.0
1,880,807	+		Atu1903	0.42	+0.0
1,881,020	+		Atu1903	0.56	+0.0
1,881,102	-		Atu1903	0.62	+2.5
1,881,205	+		Atu1903	0.69	+0.0
1,881,232	-		Atu1903	0.71	-0.2
1,881,271	-		Atu1903	0.73	+0.2
1,881,325	-		Atu1903	0.77	-0.4
1,881,522	+				+0.2
1,881,722	+				-1.8
1,881,740	-				-0.5
1,881,835	-		Atu1904	0.14	-1.5
1,882,037	+		Atu1904	0.35	-0.2
1,882,078	+		Atu1904	0.40	-0.4
1,882,083	-		Atu1904	0.40	+0.7
1,882,729	-				+0.5
1,882,774	-		Atu1905	0.14	+0.2
1,882,794	-		Atu1905	0.16	-1.0
1,882,892	-		Atu1905	0.29	+0.3
1,882,926	-		Atu1905	0.33	+0.1
1,883,128	+		Atu1905	0.59	-0.2
1,883,136	-		Atu1905	0.60	+0.6
1,883,205	-		Atu1905	0.68	-0.8
1,883,318	+		Atu1905	0.83	+0.1
1,883,467	+				+0.0
1,883,472	-				-0.3
1,883,472	-				+0.0
1,883,521	-				-0.2
1,883,521	-				-0.6
1,883,523	+				-0.9
1,883,597	+				+0.1