Strain Fitness in Agrobacterium fabrum C58 around Atu1853

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,832,862	-		Atu1852	0.24	+0.2
1,832,958	-		Atu1852	0.33	+1.7
1,833,057	-		Atu1852	0.41	+0.3
1,833,059	+		Atu1852	0.42	-0.1
1,833,110	-		Atu1852	0.46	+0.4
1,833,112	+		Atu1852	0.46	+0.5
1,833,124	+		Atu1852	0.47	-0.1
1,833,147	+		Atu1852	0.49	-0.7
1,833,222	+		Atu1852	0.56	-0.5
1,833,237	+		Atu1852	0.57	-0.1
1,833,279	-		Atu1852	0.61	+0.2
1,833,306	-		Atu1852	0.63	-0.1
1,833,371	-		Atu1852	0.69	+0.3
1,833,430	-		Atu1852	0.74	-0.1
1,833,561	-		Atu1852	0.85	+0.1
1,833,738	+				-0.7
1,833,867	-		Atu1853	0.10	-0.4
1,833,876	+		Atu1853	0.14	-0.6
1,833,899	-		Atu1853	0.23	-0.4
1,834,179	+				-0.1
1,834,199	-				+0.0
1,834,212	-				-0.7
1,834,224	+				+0.3
1,834,542	+				+0.1
1,834,624	+				-0.2
1,834,701	+				+0.0
1,834,771	+				+0.1
1,834,771	+				+0.1
1,834,832	+		Atu1855	0.10	+0.5
1,834,924	-		Atu1855	0.18	+0.3
1,835,001	+		Atu1855	0.24	+1.4