Strain Fitness in Agrobacterium fabrum C58 around Atu1777

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,760,768	+				-0.2
1,760,934	+				+1.1
1,761,054	-		Atu1776	0.20	-0.8
1,761,145	-		Atu1776	0.32	-0.3
1,761,239	+		Atu1776	0.43	+0.4
1,761,321	-		Atu1776	0.54	+0.2
1,761,340	+		Atu1776	0.56	-0.1
1,761,349	+		Atu1776	0.57	+0.1
1,761,364	-		Atu1776	0.59	+0.0
1,761,418	+		Atu1776	0.66	+0.1
1,761,435	+		Atu1776	0.68	-0.8
1,761,578	+		Atu1776	0.86	-0.1
1,761,668	+				-1.9
1,761,715	-				-0.4
1,761,772	-				-0.7
1,761,850	+		Atu1777	0.28	-0.9
1,761,871	-		Atu1777	0.34	-0.4
1,761,926	-		Atu1777	0.50	-0.9
1,761,968	-		Atu1777	0.62	-0.1
1,762,135	-				+0.5
1,762,146	+				-0.5
1,762,184	-				-1.1
1,762,205	+				-0.3
1,762,221	+				+0.0
1,762,274	+		Atu8020	0.27	-0.7
1,762,282	-		Atu8020	0.30	+0.7
1,762,435	+		Atu8020	0.85	+0.0
1,762,443	-		Atu8020	0.88	+0.4
1,762,522	+				-0.3
1,762,587	+				-0.8
1,762,702	+				+0.1
1,762,761	-				-0.6
1,762,775	-				+0.5
1,762,885	-		Atu1778	0.11	+0.9
1,762,958	+		Atu1778	0.13	-1.5