Strain Fitness in Agrobacterium fabrum C58 around Atu1463

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,459,814	-		Atu1462	0.69	-1.1
1,459,830	+		Atu1462	0.70	-0.3
1,459,830	+		Atu1462	0.70	-0.3
1,459,830	+		Atu1462	0.70	-0.6
1,459,838	-		Atu1462	0.70	-0.2
1,459,838	-		Atu1462	0.70	+1.4
1,459,860	-		Atu1462	0.71	+0.0
1,459,929	-		Atu1462	0.73	-0.6
1,459,974	+		Atu1462	0.75	-0.5
1,460,000	-		Atu1462	0.76	-0.3
1,460,133	-		Atu1462	0.80	-1.1
1,460,135	+		Atu1462	0.80	-0.6
1,460,155	+		Atu1462	0.81	-1.0
1,460,182	+		Atu1462	0.82	-0.5
1,460,190	-		Atu1462	0.82	-0.6
1,460,286	+		Atu1462	0.86	-0.4
1,460,442	+				-1.0
1,460,489	-				-0.7
1,460,512	+				+0.9
1,460,520	-				+0.2
1,460,565	-				-0.1
1,460,577	+				-0.1
1,460,610	-				-0.2
1,460,764	+		Atu1463	0.18	-0.7
1,460,805	-		Atu1463	0.29	-0.4
1,460,810	-		Atu1463	0.31	+0.0
1,460,826	+		Atu1463	0.35	-0.5
1,460,920	+		Atu1463	0.61	-0.6
1,460,977	+		Atu1463	0.77	-0.5
1,461,087	+				-1.6
1,461,095	-				+0.3
1,461,095	-				+0.2
1,461,125	-				-0.1
1,461,151	-				+0.0
1,461,230	-		Atu1464	0.13	-0.0
1,461,279	+		Atu1464	0.18	+0.6
1,461,606	-		Atu1464	0.48	+0.0
1,461,690	-		Atu1464	0.56	-0.4
1,461,724	+		Atu1464	0.59	+0.0
1,461,724	+		Atu1464	0.59	-1.0
1,461,749	-		Atu1464	0.61	+0.4
1,461,924	+		Atu1464	0.78	-0.4