Strain Fitness in Agrobacterium fabrum C58 around Atu1293

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,283,201	+				+0.4
1,283,208	+				+0.1
1,283,209	+				-0.4
1,283,209	-				-0.0
1,283,369	+		Atu1293	0.12	+0.8
1,283,384	-		Atu1293	0.13	+0.0
1,283,421	-		Atu1293	0.16	+0.9
1,283,636	+		Atu1293	0.34	-0.0
1,283,796	+		Atu1293	0.47	+0.1
1,284,053	-		Atu1293	0.67	+0.4
1,284,205	+		Atu1293	0.80	+0.1
1,284,383	+				+0.6
1,284,524	-				+0.4
1,284,756	-		Atu1294	0.12	+0.1
1,284,831	-		Atu1294	0.18	+0.2
1,284,859	+		Atu1294	0.20	+0.9
1,284,874	-		Atu1294	0.21	-0.2
1,284,881	-		Atu1294	0.22	+1.0
1,284,989	-		Atu1294	0.31	-0.5
1,285,061	-		Atu1294	0.37	-0.0
1,285,070	+		Atu1294	0.37	+0.3
1,285,122	-		Atu1294	0.42	+0.7
1,285,131	+		Atu1294	0.42	-0.7
1,285,217	+		Atu1294	0.50	-1.3
1,285,218	-		Atu1294	0.50	-0.0