Strain Fitness in Agrobacterium fabrum C58 around Atu1191

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,182,421	+				-0.2
1,182,428	-				-0.1
1,182,429	-				-0.5
1,182,429	-				+0.8
1,182,434	+				-0.1
1,182,504	+				+0.6
1,182,509	+				+0.1
1,182,517	-				-0.3
1,182,592	+				-0.4
1,182,593	+				+0.8
1,182,601	-				+0.1
1,182,601	-				+0.3
1,182,813	+		Atu1190	0.17	-0.5
1,182,884	-		Atu1190	0.29	-0.5
1,182,964	-		Atu1190	0.43	+0.4
1,183,026	+		Atu1190	0.53	-0.0
1,183,087	+		Atu1190	0.64	-0.2
1,183,186	-		Atu1190	0.81	+0.9
1,183,360	-				+1.0
1,183,361	+				+0.3
1,183,421	+				+0.2
1,183,429	-				-1.2
1,183,429	-				-1.2
1,183,439	+				-1.0
1,183,501	+		Atu1191	0.28	+0.0
1,183,537	+		Atu1191	0.40	+0.1
1,183,547	+		Atu1191	0.43	+0.5
1,183,550	-		Atu1191	0.44	+1.1
1,183,702	+				-0.6
1,183,707	+				-0.2
1,183,707	+				+0.5
1,183,707	+				+0.3
1,183,707	+				+0.1
1,183,707	+				-0.1
1,183,712	+				+0.4
1,183,715	-				+0.3
1,183,753	-				+0.0
1,183,775	+				+0.1
1,183,784	-				-0.6
1,183,789	+				-0.0
1,183,832	+				+0.0
1,183,843	+				-0.7
1,183,855	+				+0.1
1,184,073	-				+0.1
1,184,143	-				-0.2