Strain Fitness in Agrobacterium fabrum C58 around Atu1182

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,174,367	+				-0.4
1,174,860	+		Atu1181	0.89	-1.6
1,174,996	-				-0.2
1,175,562	-		Atu1182	0.76	+1.2
1,175,562	-		Atu1182	0.76	+1.7
1,175,649	-		Atu1182	0.88	-1.0
1,175,757	-				-0.3
1,175,763	+				+0.1
1,175,763	+				-0.1
1,175,771	-				+0.1
1,175,819	-				-1.0
1,175,844	-				+0.4
1,175,844	-				-0.5
1,175,968	-				-0.5
1,176,111	-				+0.2
1,176,112	-				+0.3
1,176,122	+				-0.6
1,176,333	+				+0.2
1,176,566	-		Atu1183	0.11	+0.3
1,176,687	+		Atu1183	0.16	+0.8
1,176,688	+		Atu1183	0.16	+0.7
1,176,714	+		Atu1183	0.17	+0.0