Experiment: Mandelic 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0193 and Atu0194 overlap by 26 nucleotides
Atu0193: Atu0193 - glutamine synthetase, at 196,923 to 198,281
Atu0193
Atu0194: Atu0194 - oxidoreductase, at 198,256 to 199,584
Atu0194
Position (kb) 196
197
198
199 Strain fitness (log2 ratio) -2
-1
0
1 at 196.015 kb on + strand at 196.020 kb on + strand at 196.083 kb on - strand at 196.085 kb on - strand at 196.126 kb on + strand at 196.128 kb on + strand at 196.142 kb on + strand at 196.167 kb on + strand at 196.194 kb on + strand at 196.200 kb on - strand at 196.200 kb on - strand at 196.200 kb on - strand at 196.274 kb on + strand at 196.275 kb on + strand at 196.285 kb on + strand at 196.345 kb on - strand at 196.347 kb on + strand at 196.355 kb on - strand at 196.362 kb on - strand at 196.405 kb on + strand at 196.469 kb on + strand at 196.505 kb on + strand at 196.505 kb on + strand at 196.505 kb on + strand at 196.505 kb on + strand at 196.513 kb on - strand at 196.538 kb on - strand at 196.556 kb on - strand at 196.610 kb on - strand at 196.647 kb on + strand at 196.812 kb on + strand at 196.853 kb on - strand at 196.986 kb on + strand at 197.446 kb on - strand, within Atu0193 at 197.510 kb on + strand, within Atu0193 at 197.518 kb on - strand, within Atu0193 at 197.678 kb on + strand, within Atu0193 at 197.883 kb on + strand, within Atu0193 at 197.888 kb on + strand, within Atu0193 at 197.888 kb on + strand, within Atu0193 at 198.194 kb on + strand at 198.261 kb on + strand at 198.275 kb on + strand at 198.322 kb on + strand at 198.368 kb on + strand at 198.434 kb on + strand, within Atu0194 at 198.455 kb on + strand, within Atu0194 at 198.463 kb on - strand, within Atu0194 at 198.487 kb on - strand, within Atu0194 at 198.499 kb on - strand, within Atu0194 at 198.648 kb on - strand, within Atu0194 at 198.868 kb on - strand, within Atu0194 at 198.868 kb on - strand, within Atu0194 at 198.868 kb on - strand, within Atu0194 at 198.878 kb on - strand, within Atu0194 at 198.967 kb on + strand, within Atu0194 at 198.975 kb on - strand, within Atu0194 at 198.975 kb on - strand, within Atu0194 at 198.985 kb on - strand, within Atu0194 at 199.094 kb on + strand, within Atu0194 at 199.108 kb on - strand, within Atu0194 at 199.204 kb on + strand, within Atu0194 at 199.204 kb on + strand, within Atu0194 at 199.212 kb on - strand, within Atu0194 at 199.213 kb on - strand, within Atu0194 at 199.213 kb on - strand, within Atu0194
Per-strain Table
Position Strand Gene LocusTag Fraction Mandelic 5 mM remove 196,015 + +1.0 196,020 + -0.2 196,083 - +0.1 196,085 - +0.1 196,126 + -0.2 196,128 + +0.6 196,142 + -0.5 196,167 + +0.0 196,194 + +0.6 196,200 - +0.0 196,200 - +0.2 196,200 - +1.7 196,274 + -0.0 196,275 + +0.3 196,285 + -0.1 196,345 - +0.1 196,347 + -0.5 196,355 - +0.6 196,362 - +0.4 196,405 + +0.1 196,469 + -0.2 196,505 + +0.1 196,505 + +0.3 196,505 + +0.2 196,505 + -0.1 196,513 - +0.1 196,538 - +0.1 196,556 - -0.0 196,610 - -0.9 196,647 + -1.9 196,812 + -0.3 196,853 - -0.3 196,986 + -0.5 197,446 - Atu0193 0.38 +0.7 197,510 + Atu0193 0.43 +0.1 197,518 - Atu0193 0.44 -0.5 197,678 + Atu0193 0.56 +0.1 197,883 + Atu0193 0.71 +0.3 197,888 + Atu0193 0.71 +0.1 197,888 + Atu0193 0.71 +1.0 198,194 + -0.1 198,261 + -0.0 198,275 + -0.0 198,322 + -0.5 198,368 + +0.7 198,434 + Atu0194 0.13 +0.5 198,455 + Atu0194 0.15 -0.0 198,463 - Atu0194 0.16 +0.3 198,487 - Atu0194 0.17 +0.0 198,499 - Atu0194 0.18 -0.4 198,648 - Atu0194 0.29 +0.9 198,868 - Atu0194 0.46 -0.0 198,868 - Atu0194 0.46 +0.1 198,868 - Atu0194 0.46 -0.4 198,878 - Atu0194 0.47 -0.2 198,967 + Atu0194 0.53 -0.1 198,975 - Atu0194 0.54 -0.4 198,975 - Atu0194 0.54 +0.6 198,985 - Atu0194 0.55 +0.0 199,094 + Atu0194 0.63 +0.1 199,108 - Atu0194 0.64 +0.1 199,204 + Atu0194 0.71 +0.3 199,204 + Atu0194 0.71 -0.3 199,212 - Atu0194 0.72 -0.9 199,213 - Atu0194 0.72 -0.1 199,213 - Atu0194 0.72 -0.3
Or see this region's nucleotide sequence