Strain Fitness in Agrobacterium fabrum C58 around Atu0116

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
120,821	-		Atu0115	0.45	-0.2
120,945	-				-0.2
120,999	-				-0.5
121,001	+				-0.2
121,009	-				+0.6
121,009	-				+0.5
121,034	+				+0.2
121,063	+				-0.2
121,104	+				-0.2
121,191	+				-0.3
121,191	+				-0.8
121,199	-				+0.1
121,199	-				-0.4
121,260	-				+0.8
121,363	-				-0.4
121,381	+				+0.0
121,381	+				+0.1
121,426	-				+0.7
121,466	-				-0.2
121,476	-				-0.1
121,499	+				+0.3
121,507	-				+0.9
121,525	+				-0.0
121,565	-		Atu0116	0.15	-0.1
121,581	-		Atu0116	0.19	+1.0
121,677	+		Atu0116	0.43	+0.2
121,713	-		Atu0116	0.51	+0.1
121,735	+		Atu0116	0.57	+0.1
121,743	-		Atu0116	0.59	+0.2
121,771	-		Atu0116	0.65	+0.5
121,986	-				-0.4
122,100	-		Atu0117	0.19	+0.2
122,216	+		Atu0117	0.44	+0.1
122,221	+		Atu0117	0.45	+0.0
122,303	-		Atu0117	0.63	-0.3
122,340	+		Atu0117	0.71	+0.2
122,355	+		Atu0117	0.74	-0.1
122,492	-				+0.3
122,616	+				-0.4
122,728	+		Atu0118	0.16	-0.1
122,733	-		Atu0118	0.17	-0.4
122,791	+		Atu0118	0.20	+0.1