Strain Fitness in Pseudomonas putida KT2440 around PP_2637

Experiment: pH 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5
3,017,591	-		PP_2636	0.66	-1.1
3,017,599	+		PP_2636	0.67	+2.9
3,017,599	+		PP_2636	0.67	-1.5
3,017,599	+		PP_2636	0.67	-1.4
3,017,599	+		PP_2636	0.67	-0.2
3,017,600	-		PP_2636	0.67	-0.4
3,017,600	-		PP_2636	0.67	-0.2
3,017,600	-		PP_2636	0.67	-0.2
3,017,600	-		PP_2636	0.67	-1.1
3,017,600	-		PP_2636	0.67	-1.1
3,017,600	-		PP_2636	0.67	-0.6
3,018,086	-		PP_2636	0.88	-2.1
3,018,086	-		PP_2636	0.88	-0.3
3,018,116	+		PP_2636	0.89	-1.6
3,018,117	-		PP_2636	0.89	-0.1
3,018,197	-				+0.2
3,018,197	-				+1.2
3,018,537	+		PP_2637	0.16	-0.2
3,018,537	+		PP_2637	0.16	-0.9
3,018,538	-		PP_2637	0.16	-1.1
3,018,559	+		PP_2637	0.18	-0.9
3,018,906	+		PP_2637	0.49	-1.9
3,018,907	-		PP_2637	0.49	-2.0
3,019,086	+		PP_2637	0.65	+1.2
3,019,086	+		PP_2637	0.65	-0.4
3,019,087	-		PP_2637	0.65	-2.0
3,019,087	-		PP_2637	0.65	-1.4
3,019,087	-		PP_2637	0.65	-0.5
3,019,104	+		PP_2637	0.67	-1.7
3,019,105	-				+2.9
3,019,164	+		PP_2637	0.72	-0.7
3,019,365	+				-0.3
3,019,369	-				-3.2
3,019,369	-				-0.7
3,019,864	-		PP_2638	0.11	-0.3
3,019,866	-		PP_2638	0.11	-0.6
3,019,917	-		PP_2638	0.13	-3.1
3,019,992	-				+2.5
3,020,133	-		PP_2638	0.19	-0.1
3,020,195	+		PP_2638	0.21	-0.1