Strain Fitness in Pseudomonas putida KT2440 around PP_2575

Experiment: pH 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5
2,940,763	+				-0.4
2,940,763	+				+0.1
2,940,764	-				+2.2
2,940,764	-				-1.2
2,940,778	+				-0.0
2,940,779	-				-1.8
2,940,780	+				+1.1
2,940,780	+				-3.5
2,940,781	-				+0.6
2,940,781	-				+1.0
2,940,781	-				+1.8
2,940,800	-				-1.4
2,940,853	+				-1.7
2,940,853	+				+1.7
2,940,854	-				-0.8
2,940,854	-				+3.8
2,941,093	+		PP_2574	0.36	+0.8
2,941,220	-		PP_2574	0.49	-0.7
2,941,279	+		PP_2574	0.56	+0.7
2,941,279	+		PP_2574	0.56	+0.6
2,941,280	-		PP_2574	0.56	+1.0
2,941,387	+		PP_2574	0.68	+1.2
2,941,388	-		PP_2574	0.68	-0.8
2,941,388	-		PP_2574	0.68	-0.0
2,941,388	-		PP_2574	0.68	-1.6
2,941,388	-		PP_2574	0.68	+0.2
2,941,522	+		PP_2574	0.83	-1.0
2,941,523	-		PP_2574	0.83	-0.8
2,941,528	+		PP_2574	0.83	+0.0
2,941,706	+				+2.3
2,941,706	+				-1.0
2,941,706	+				-1.7
2,941,707	-				+1.3
2,941,707	-				+3.0
2,941,769	+				+1.3
2,941,932	-		PP_2575	0.43	-1.2
2,941,969	+		PP_2575	0.51	-0.4
2,942,238	+				-0.5
2,942,239	-				-0.0
2,942,282	+				-0.5
2,942,398	+				+0.6
2,942,398	+				+0.3
2,942,398	+				+1.3
2,942,399	-				+0.7
2,942,539	+				+0.3
2,942,539	+				-0.6
2,942,539	+				+1.1
2,942,539	+				-0.3
2,942,540	-				+1.9
2,942,540	-				+0.1
2,942,626	-				-0.2
2,942,943	-				-2.0
2,942,943	-				-1.8
2,943,121	-				-1.1
2,943,174	-				+0.5
2,943,174	-				-0.7