Strain Fitness in Pseudomonas putida KT2440 around PP_1611

Experiment: pH 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5
1,808,070	+		PP_1611	0.14	+0.4
1,808,070	+		PP_1611	0.14	+0.1
1,808,071	-		PP_1611	0.14	-0.9
1,808,071	-		PP_1611	0.14	+0.2
1,808,071	-		PP_1611	0.14	-2.3
1,808,071	-		PP_1611	0.14	-0.7
1,808,104	-		PP_1611	0.18	-0.1
1,808,154	+		PP_1611	0.24	+3.1
1,808,155	-		PP_1611	0.24	-3.6
1,808,155	-		PP_1611	0.24	-0.6
1,808,273	-		PP_1611	0.38	-0.6
1,808,273	-		PP_1611	0.38	-0.9
1,808,273	-		PP_1611	0.38	-2.6
1,808,440	+		PP_1611	0.58	-1.1
1,808,441	-		PP_1611	0.58	-0.5
1,808,441	-		PP_1611	0.58	-4.7
1,808,469	+		PP_1611	0.61	-2.5
1,808,717	+				+0.2
1,808,718	-				-4.1
1,808,782	+				-1.0
1,808,793	+				+0.1
1,808,908	+				+0.6
1,808,908	+				+0.1
1,808,913	+				-0.3
1,808,913	+				-0.3
1,808,913	+				-0.6