Strain Fitness in Pseudomonas putida KT2440 around PP_1470

Experiment: pH 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5
1,673,915	-				+0.1
1,673,915	-				-2.3
1,673,915	-				-5.0
1,673,957	-				-0.9
1,674,054	+		PP_1469	0.11	-1.0
1,674,054	+		PP_1469	0.11	+1.6
1,674,055	-		PP_1469	0.11	-2.3
1,674,082	-		PP_1469	0.15	-3.5
1,674,111	+		PP_1469	0.18	-0.2
1,674,111	+		PP_1469	0.18	-0.5
1,674,111	+		PP_1469	0.18	-1.6
1,674,181	+		PP_1469	0.27	-0.9
1,674,181	+		PP_1469	0.27	-0.9
1,674,181	+		PP_1469	0.27	+0.1
1,674,181	+		PP_1469	0.27	+0.0
1,674,182	-		PP_1469	0.27	+0.1
1,674,214	+		PP_1469	0.31	+0.6
1,674,215	-		PP_1469	0.32	+0.1
1,674,250	+		PP_1469	0.36	-0.4
1,674,251	-		PP_1469	0.36	+0.1
1,674,312	+		PP_1469	0.44	-0.2
1,674,408	+		PP_1469	0.56	-0.2
1,674,408	+		PP_1469	0.56	-2.0
1,674,408	+		PP_1469	0.56	+0.0
1,674,408	+		PP_1469	0.56	-0.2
1,674,478	+		PP_1469	0.65	-1.4
1,674,479	-				+0.1
1,674,748	+				+0.9
1,674,748	+				-3.6
1,674,748	+				-0.7
1,674,748	+				+0.7
1,674,761	+				+5.1
1,674,761	+				-5.4
1,674,895	+				+0.1
1,675,076	+				+0.1
1,675,076	+				+0.1
1,675,716	+				+0.1
1,675,716	+		PP_1470	0.68	+0.1
1,675,733	+				+0.1
1,675,742	+				+0.1
1,675,887	+		PP_1470	0.81	+0.1
1,675,890	+				+0.1
1,676,143	+				-1.2