Strain Fitness in Pseudomonas putida KT2440 around PP_1345

Experiment: pH 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5
1,531,196	+				-0.7
1,531,196	+				-0.9
1,531,196	+				+3.3
1,531,213	+				-2.5
1,531,213	+				+2.2
1,531,213	+				+1.6
1,531,214	-				+0.1
1,531,214	-				+0.1
1,531,214	-				+1.0
1,531,222	-				-1.5
1,531,695	-		PP_1344	0.71	+0.1
1,531,695	-		PP_1344	0.71	+0.1
1,531,734	+		PP_1344	0.77	-0.3
1,531,804	+		PP_1344	0.89	+0.1
1,531,909	+				-2.2
1,531,939	+				+0.1
1,534,559	+				+0.1
1,534,559	+				+0.1
1,534,700	+				+0.1
1,534,819	+				-0.9
1,534,819	+				-0.6
1,534,819	+				-3.1
1,534,820	-				+1.1
1,534,820	-				-0.9
1,534,827	-				+0.5
1,534,827	-				+0.6
1,534,980	-				-0.4
1,534,980	-				-0.8
1,534,990	+				+0.2
1,534,990	+				-3.6
1,534,990	+				+0.6
1,534,990	+				-2.5
1,535,188	+		PP_1346	0.16	-3.7
1,535,188	+		PP_1346	0.16	-0.5
1,535,189	-		PP_1346	0.16	+3.9
1,535,206	-		PP_1346	0.18	-0.9
1,535,603	-		PP_1346	0.50	-1.0