Strain Fitness in Agrobacterium fabrum C58 around Atu4126

Experiment: Mandelic 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mandelic 5 mM
1,243,506	+		Atu4124	0.68	+0.2
1,243,547	+		Atu4124	0.73	-0.3
1,243,600	-		Atu4124	0.80	-0.4
1,243,600	-		Atu4124	0.80	+0.3
1,243,607	+		Atu4124	0.81	-0.8
1,243,615	-		Atu4124	0.82	-0.3
1,243,633	+		Atu4124	0.84	-0.2
1,243,721	-				-0.4
1,243,744	-				+0.2
1,243,807	+				-0.5
1,243,826	-				-1.2
1,243,826	-				+0.1
1,243,886	+		Atu4125	0.17	-0.4
1,243,887	+		Atu4125	0.18	-0.1
1,243,904	+		Atu4125	0.20	-1.4
1,244,022	-		Atu4125	0.37	-0.4
1,244,128	+		Atu4125	0.52	-0.3
1,244,138	+		Atu4125	0.53	+0.5
1,244,146	-		Atu4125	0.54	-1.6
1,244,303	-		Atu4125	0.77	-0.2
1,244,329	-		Atu4125	0.80	-0.1
1,244,500	-				-0.5
1,244,511	-				-0.3
1,244,535	-				+0.2
1,244,688	+		Atu4126	0.25	-0.8
1,244,688	+		Atu4126	0.25	-0.4
1,244,696	-		Atu4126	0.26	-0.2
1,244,733	+		Atu4126	0.30	-0.5
1,244,827	+		Atu4126	0.40	-0.8
1,244,853	+		Atu4126	0.43	+0.0
1,244,856	-		Atu4126	0.44	-0.3
1,244,856	-		Atu4126	0.44	+1.2
1,244,856	-		Atu4126	0.44	+0.1
1,244,856	-		Atu4126	0.44	-0.3
1,244,862	+		Atu4126	0.44	-1.3
1,244,951	+		Atu4126	0.54	-0.0
1,244,996	-		Atu4126	0.59	-0.2
1,244,996	-		Atu4126	0.59	+0.2
1,245,025	+		Atu4126	0.63	+0.9
1,245,077	-		Atu4126	0.69	-0.4
1,245,077	-		Atu4126	0.69	-0.4
1,245,097	+		Atu4126	0.71	-1.3
1,245,105	-		Atu4126	0.72	+0.2
1,245,147	+		Atu4126	0.76	-0.1
1,245,155	-		Atu4126	0.77	-0.3
1,245,200	-		Atu4126	0.82	-0.1
1,245,213	-		Atu4126	0.84	-0.3
1,245,218	-		Atu4126	0.84	+0.2
1,245,235	+		Atu4126	0.86	-0.7
1,245,243	-		Atu4126	0.87	-1.3
1,245,256	-		Atu4126	0.89	+0.1
1,245,270	-				-0.9
1,245,275	-				-0.2
1,245,306	+				-0.3
1,245,314	-				+0.6
1,245,359	+				-0.5
1,245,367	-				+0.1
1,245,367	-				+0.4
1,245,428	+				-0.7
1,245,525	-		Atu4127	0.17	+0.3
1,245,635	-		Atu4127	0.28	-0.1
1,245,657	+		Atu4127	0.30	+0.9
1,245,851	-		Atu4127	0.49	+0.5
1,245,880	-		Atu4127	0.52	-0.4
1,245,881	+		Atu4127	0.52	-0.0
1,245,891	+		Atu4127	0.53	-0.0
1,245,966	-		Atu4127	0.60	-0.2
1,246,110	+		Atu4127	0.75	+0.1
1,246,197	+		Atu4127	0.83	+0.3
1,246,269	-				+0.3
1,246,269	-				+0.2