Strain Fitness in Pseudomonas putida KT2440 around PP_2530

Experiment: pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4
2,875,158	+		PP_2528	0.43	+1.8
2,875,269	+		PP_2528	0.52	-2.6
2,875,269	+				-0.6
2,875,408	+		PP_2528	0.63	+0.5
2,875,409	-				+0.7
2,875,442	+		PP_2528	0.65	+0.9
2,875,443	-		PP_2528	0.66	-1.1
2,875,552	-		PP_2528	0.74	+0.8
2,875,728	+		PP_2528	0.88	+1.4
2,875,728	+		PP_2528	0.88	-0.2
2,875,806	+				-0.6
2,875,806	+				-0.7
2,875,807	-				+2.7
2,875,807	-				+2.0
2,875,807	-				-0.6
2,875,814	+				-1.6
2,876,001	-				-1.7
2,876,007	-				+0.1
2,876,007	-				+3.4
2,876,042	+				-0.3
2,876,043	-				+0.3
2,876,068	+				-0.2
2,876,069	-				+3.2
2,876,087	-				-4.0
2,876,262	+		PP_2530	0.62	+0.2
2,876,263	-		PP_2530	0.62	+0.9
2,876,380	+				-0.4
2,876,472	+				+0.1
2,876,473	-				+0.7
2,876,550	+		PP_2531	0.17	-0.5
2,876,570	+		PP_2531	0.19	+2.9
2,876,608	-		PP_2531	0.23	+0.1
2,876,695	+		PP_2531	0.32	+0.2
2,876,696	-		PP_2531	0.32	-1.4
2,876,696	-		PP_2531	0.32	-1.9
2,876,926	+		PP_2531	0.55	-0.0
2,876,926	+		PP_2531	0.55	+0.6
2,876,927	-		PP_2531	0.55	+0.0
2,876,927	-		PP_2531	0.55	-1.0
2,876,927	-		PP_2531	0.55	-0.5
2,876,927	-		PP_2531	0.55	+1.1
2,876,937	-		PP_2531	0.56	-2.2
2,876,943	+		PP_2531	0.57	+1.9
2,876,959	+		PP_2531	0.58	+0.7
2,876,960	-		PP_2531	0.58	-0.2
2,876,960	-		PP_2531	0.58	+0.4
2,877,034	+		PP_2531	0.66	+1.7
2,877,041	-		PP_2531	0.66	-1.1
2,877,088	+		PP_2531	0.71	-3.1
2,877,292	+				+2.3