Strain Fitness in Pseudomonas putida KT2440 around PP_1096

Experiment: pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4
1,251,957	-		PP_1095	0.12	-0.7
1,251,957	-		PP_1095	0.12	-1.2
1,251,957	-		PP_1095	0.12	+1.2
1,252,132	+		PP_1095	0.30	-0.1
1,252,132	+		PP_1095	0.30	+1.5
1,252,189	+		PP_1095	0.36	-0.3
1,252,189	+		PP_1095	0.36	+0.3
1,252,190	-		PP_1095	0.36	+2.2
1,252,454	+		PP_1095	0.63	+0.6
1,252,454	+		PP_1095	0.63	-0.5
1,252,455	-		PP_1095	0.63	+2.0
1,252,499	+		PP_1095	0.68	+1.9
1,252,500	-		PP_1095	0.68	+2.7
1,252,500	-		PP_1095	0.68	-1.6
1,252,500	-		PP_1095	0.68	-0.4
1,252,500	-		PP_1095	0.68	+1.6
1,252,589	-		PP_1095	0.77	+0.2
1,252,618	+		PP_1095	0.80	+2.4
1,252,844	+				+1.3
1,253,080	-		PP_1096	0.50	+2.0
1,253,193	+		PP_1096	0.70	+0.5
1,253,194	-		PP_1096	0.71	+1.0
1,253,344	+				+4.0
1,253,344	+				+1.0
1,253,344	+				-0.6
1,253,414	+				+2.7
1,253,414	+				+0.2
1,253,463	-				-1.4
1,253,463	-				-0.7
1,253,463	-				-2.0
1,253,594	-				-2.7
1,253,636	+				-1.6
1,253,636	+				-0.6
1,253,772	+		PP_1097	0.15	+0.4
1,253,773	-		PP_1097	0.15	-1.2